Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm16415-201ENSMUST00000080097 489 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Gm10916-201ENSMUST00000080330 483 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Gm22971-201ENSMUST00000083305 97 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Cdx1P18111 Gm6361-201ENSMUST00000091031 435 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Cdx1P18111 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Cdx1P18111 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC4.06□□□□□ -1.76
Cdx1P18111 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Cdx1P18111 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Cdx1P18111 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
Cdx1P18111 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Cdx1P18111 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Cdx1P18111 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Cdx1P18111 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Cdx1P18111 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Cdx1P18111 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Cdx1P18111 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Cdx1P18111 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Cdx1P18111 AC154640.4-201ENSMUST00000226647 4640 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Cdx1P18111 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Cdx1P18111 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Cdx1P18111 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Cdx1P18111 Gm14621-201ENSMUST00000117709 689 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Gm13172-201ENSMUST00000118685 256 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Gm3931-201ENSMUST00000119038 455 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Gm15828-201ENSMUST00000119911 522 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Gm6175-201ENSMUST00000121351 400 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Gm14559-201ENSMUST00000121745 496 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Gm21241-201ENSMUST00000179551 934 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Gm18828-202ENSMUST00000181035 310 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Gm27855-201ENSMUST00000184122 128 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Cdx1P18111 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 Gm20819-201ENSMUST00000191091 925 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Gm20871-201ENSMUST00000191322 931 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 Gm43078-201ENSMUST00000197222 168 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Gm43794-201ENSMUST00000200971 692 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Gm17984-201ENSMUST00000205286 859 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Gm18599-201ENSMUST00000206729 1125 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Gm19174-201ENSMUST00000216944 956 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC4.05□□□□□ -1.76
Cdx1P18111 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Gm18904-201ENSMUST00000218756 329 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.05□□□□□ -1.76
Cdx1P18111 AC153870.1-201ENSMUST00000219599 560 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC4.05□□□□□ -1.76
Cdx1P18111 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 AC192088.3-201ENSMUST00000227858 831 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Cdx1P18111 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Cdx1P18111 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
Cdx1P18111 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Cdx1P18111 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdx1P18111 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Cdx1P18111 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
Cdx1P18111 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.05□□□□□ -1.76
Cdx1P18111 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.04□□□□□ -1.76
Cdx1P18111 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Cdx1P18111 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Cdx1P18111 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Cdx1P18111 Gm7646-201ENSMUST00000198590 1346 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 AC124556.1-201ENSMUST00000218256 1319 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Cdx1P18111 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Cdx1P18111 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Cdx1P18111 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
Cdx1P18111 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC4.04□□□□□ -1.76
Cdx1P18111 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Cdx1P18111 Gm11408-201ENSMUST00000117889 519 ntBASIC4.04□□□□□ -1.76
Cdx1P18111 Gm15766-201ENSMUST00000118025 813 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms