Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 AC158525.1-201ENSMUST00000223806 576 ntBASIC6.56□□□□□ -1.36
Clp1Q99LI9 AC154583.1-201ENSMUST00000224788 655 ntBASIC6.56□□□□□ -1.36
Clp1Q99LI9 AC125539.2-201ENSMUST00000228339 753 ntBASIC6.56□□□□□ -1.36
Clp1Q99LI9 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Clp1Q99LI9 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Clp1Q99LI9 n-R5s37-201ENSMUST00000082533 118 ntBASIC6.56□□□□□ -1.36
Clp1Q99LI9 Mir484-201ENSMUST00000093566 67 ntBASIC6.56□□□□□ -1.36
Clp1Q99LI9 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Clp1Q99LI9 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Clp1Q99LI9 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Clp1Q99LI9 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.56□□□□□ -1.36
Clp1Q99LI9 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Clp1Q99LI9 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Clp1Q99LI9 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC6.56□□□□□ -1.36
Clp1Q99LI9 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Clp1Q99LI9 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Clp1Q99LI9 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Clp1Q99LI9 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm29084-201ENSMUST00000185587 1452 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Clp1Q99LI9 AC151831.1-201ENSMUST00000227609 4033 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Clp1Q99LI9 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 Clec2f-201ENSMUST00000121051 374 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm12340-201ENSMUST00000121617 462 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm14970-201ENSMUST00000122289 355 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm22960-201ENSMUST00000122517 104 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm23280-201ENSMUST00000157905 139 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm23179-201ENSMUST00000158693 304 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm22529-201ENSMUST00000158817 123 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm27004-201ENSMUST00000183300 727 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm2053-201ENSMUST00000195671 631 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm19060-201ENSMUST00000201959 421 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm43026-201ENSMUST00000202972 325 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm31166-201ENSMUST00000209326 288 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm20304-201ENSMUST00000218168 444 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Clp1Q99LI9 AC166358.3-201ENSMUST00000221456 181 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 AC125543.4-201ENSMUST00000223385 117 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 AC168056.2-201ENSMUST00000223591 269 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm24041-201ENSMUST00000083115 156 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm24446-201ENSMUST00000083982 156 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm43900-201ENSMUST00000204868 2669 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 AC112142.1-203ENSMUST00000228670 2472 ntBASIC6.55□□□□□ -1.36
Clp1Q99LI9 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Clp1Q99LI9 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Clp1Q99LI9 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clp1Q99LI9 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.54□□□□□ -1.36
Clp1Q99LI9 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clp1Q99LI9 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC6.54□□□□□ -1.36
Clp1Q99LI9 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC6.54□□□□□ -1.36
Clp1Q99LI9 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC6.54□□□□□ -1.36
Clp1Q99LI9 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Clp1Q99LI9 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clp1Q99LI9 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clp1Q99LI9 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Clp1Q99LI9 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Clp1Q99LI9 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clp1Q99LI9 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC6.54□□□□□ -1.36
Clp1Q99LI9 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Clp1Q99LI9 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Clp1Q99LI9 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Clp1Q99LI9 Gm3943-201ENSMUST00000118606 718 ntBASIC6.54□□□□□ -1.36
Clp1Q99LI9 Gm14128-201ENSMUST00000119514 1011 ntBASIC6.54□□□□□ -1.36
Clp1Q99LI9 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.54□□□□□ -1.36
Clp1Q99LI9 Gm5287-201ENSMUST00000120666 598 ntBASIC6.54□□□□□ -1.36
Clp1Q99LI9 Gm12650-201ENSMUST00000121966 258 ntBASIC6.54□□□□□ -1.36
Clp1Q99LI9 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Clp1Q99LI9 Gm26372-201ENSMUST00000157831 236 ntBASIC6.54□□□□□ -1.36
Clp1Q99LI9 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Clp1Q99LI9 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Clp1Q99LI9 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.54□□□□□ -1.36
Clp1Q99LI9 Gm23648-201ENSMUST00000180301 107 ntBASIC6.54□□□□□ -1.36
Clp1Q99LI9 Mir6337-201ENSMUST00000184194 105 ntBASIC6.54□□□□□ -1.36
Clp1Q99LI9 Mir7093-201ENSMUST00000184195 101 ntBASIC6.54□□□□□ -1.36
Clp1Q99LI9 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms