Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm23193-201ENSMUST00000102427 82 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm15073-201ENSMUST00000117432 634 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm14706-201ENSMUST00000117744 255 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm12901-201ENSMUST00000118690 532 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm15785-201ENSMUST00000119145 694 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm12041-201ENSMUST00000121606 602 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm25293-201ENSMUST00000122792 285 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm20657-201ENSMUST00000177079 515 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Mir7012-201ENSMUST00000183900 64 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm4557-201ENSMUST00000185826 907 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm4526-201ENSMUST00000186039 920 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm28097-201ENSMUST00000187333 366 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm8708-201ENSMUST00000188500 906 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm8939-201ENSMUST00000192577 964 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm43418-201ENSMUST00000201334 428 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm44779-201ENSMUST00000206937 708 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm45660-201ENSMUST00000210267 151 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm8556-201ENSMUST00000210437 664 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 AL671874.1-201ENSMUST00000223746 1123 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Clec2j-201ENSMUST00000032517 515 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.57□□□□□ -1.68
Lsm1Q8VC85 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Lsm1Q8VC85 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm11822-201ENSMUST00000119177 415 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm11325-201ENSMUST00000119967 469 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm13537-201ENSMUST00000120467 267 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm23229-201ENSMUST00000157297 105 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm25342-201ENSMUST00000157459 122 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm2959-201ENSMUST00000169844 621 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm28467-201ENSMUST00000190981 318 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm37436-201ENSMUST00000193842 1085 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm7825-201ENSMUST00000204046 416 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm2522-201ENSMUST00000204280 322 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.56□□□□□ -1.68
Lsm1Q8VC85 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 AL589696.1-201ENSMUST00000225711 330 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 AC080021.1-201ENSMUST00000228104 700 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 AC166574.7-201ENSMUST00000228502 704 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 CT009600.1-201ENSMUST00000228771 337 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm23514-201ENSMUST00000082827 130 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms