Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm23158-201ENSMUST00000175076 126 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm22907-201ENSMUST00000175198 126 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm22625-201ENSMUST00000175382 126 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm22875-201ENSMUST00000175449 126 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm25197-201ENSMUST00000175516 126 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm27857-201ENSMUST00000176930 126 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm26268-201ENSMUST00000177685 126 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm23681-201ENSMUST00000178821 126 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm29228-201ENSMUST00000185489 418 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm28195-201ENSMUST00000186992 372 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm38248-201ENSMUST00000193744 5783 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm37332-201ENSMUST00000195853 2844 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm45311-201ENSMUST00000211086 1330 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm14212-201ENSMUST00000122023 826 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Mirlet7e-201ENSMUST00000196737 93 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 AC131997.2-201ENSMUST00000227452 362 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm8979-201ENSMUST00000183386 7296 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm9597-202ENSMUST00000227632 1387 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Neat1-201ENSMUST00000173672 20771 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm22160-201ENSMUST00000158405 328 ntBASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm8296-201ENSMUST00000185597 524 ntBASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm8498-201ENSMUST00000188227 974 ntBASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm18303-201ENSMUST00000190055 1176 ntBASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm43895-201ENSMUST00000203219 855 ntBASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 AC122035.2-201ENSMUST00000228698 462 ntBASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Olfr1143-201ENSMUST00000090708 945 ntBASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm44667-201ENSMUST00000207632 3337 ntBASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm11911-201ENSMUST00000117938 1023 ntBASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm13501-201ENSMUST00000118477 979 ntBASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm12486-201ENSMUST00000120887 541 ntBASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm15885-201ENSMUST00000122114 388 ntBASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm13092-201ENSMUST00000136346 260 ntBASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm43710-201ENSMUST00000199583 452 ntBASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm18510-201ENSMUST00000219335 1096 ntBASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Gm9616-201ENSMUST00000221154 781 ntBASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a6Q8C6K9 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms