Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm43083-201ENSMUST00000199594 476 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm44075-201ENSMUST00000204208 216 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm9560-201ENSMUST00000205012 1201 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm44571-201ENSMUST00000208092 533 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm3266-201ENSMUST00000217832 591 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 AC122371.2-201ENSMUST00000220583 366 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 AC140930.1-201ENSMUST00000221889 389 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 AC122251.2-201ENSMUST00000227341 603 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm26225-201ENSMUST00000082508 135 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm43707-201ENSMUST00000196451 3187 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm10743-201ENSMUST00000219611 2358 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC7.02□□□□□ -1.28
Trim47Q8C0E3 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.28
Trim47Q8C0E3 Gm44045-201ENSMUST00000204906 2520 ntBASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Gm45876-201ENSMUST00000212698 2709 ntBASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Gm24709-201ENSMUST00000104123 132 ntBASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Gm11346-201ENSMUST00000118346 704 ntBASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Atf1-ps-201ENSMUST00000120608 810 ntBASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Gm15168-201ENSMUST00000121057 316 ntBASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Mir1907-201ENSMUST00000122509 90 ntBASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Gm25874-201ENSMUST00000178030 79 ntBASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Gm37511-201ENSMUST00000192901 294 ntBASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Gm37746-201ENSMUST00000193249 198 ntBASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Gm33973-201ENSMUST00000195148 534 ntBASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Gm43494-201ENSMUST00000197672 388 ntBASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Gm45473-201ENSMUST00000211452 616 ntBASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Gm45727-201ENSMUST00000212886 572 ntBASIC7.02□□□□□ -1.29
Trim47Q8C0E3 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC7.02□□□□□ -1.29
Trim47Q8C0E3 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gm5949-201ENSMUST00000213468 1421 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 AC154734.1-201ENSMUST00000219957 2141 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gm43864-201ENSMUST00000204452 4028 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gm37780-201ENSMUST00000194117 1873 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gm43921-201ENSMUST00000204296 1792 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Snord72-201ENSMUST00000104549 81 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gm12891-201ENSMUST00000119358 240 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gm11879-201ENSMUST00000121885 702 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gm12518-201ENSMUST00000122075 779 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms