Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm18878-201ENSMUST00000223071 1443 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gm42685-201ENSMUST00000200378 2390 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Mir804-201ENSMUST00000103251 95 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gm12322-201ENSMUST00000121605 389 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gm12618-201ENSMUST00000121754 483 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gm13745-201ENSMUST00000121994 527 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gm22214-201ENSMUST00000157563 172 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gm23553-201ENSMUST00000157817 295 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gm19932-201ENSMUST00000177033 313 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gm22166-201ENSMUST00000178419 121 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gm23288-201ENSMUST00000179213 121 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gm37430-201ENSMUST00000193039 196 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gm37719-201ENSMUST00000194615 292 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gm37095-201ENSMUST00000195421 205 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gm43744-201ENSMUST00000196387 688 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gm43392-201ENSMUST00000196560 434 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gm4742-201ENSMUST00000200261 771 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gm44108-201ENSMUST00000203525 422 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gm44927-201ENSMUST00000207573 716 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gm18903-201ENSMUST00000215343 480 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 AC174797.3-202ENSMUST00000224578 587 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 AC137871.2-201ENSMUST00000226482 289 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.15□□□□□ -1.42
Sh3rf1Q69ZI1 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.43
Sh3rf1Q69ZI1 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sh3rf1Q69ZI1 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.15□□□□□ -1.43
Sh3rf1Q69ZI1 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Sh3rf1Q69ZI1 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Sh3rf1Q69ZI1 Gm336-201ENSMUST00000186376 1480 ntBASIC6.15□□□□□ -1.43
Sh3rf1Q69ZI1 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sh3rf1Q69ZI1 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Sh3rf1Q69ZI1 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm38243-201ENSMUST00000194737 1567 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Mir711-201ENSMUST00000102188 82 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm26289-201ENSMUST00000104169 131 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm16511-201ENSMUST00000120019 564 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm12890-201ENSMUST00000120885 373 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm11363-201ENSMUST00000121672 548 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm6058-201ENSMUST00000154261 399 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm23894-201ENSMUST00000158107 313 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm15946-201ENSMUST00000160654 423 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm22548-201ENSMUST00000174899 78 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm22655-201ENSMUST00000174949 96 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm22242-201ENSMUST00000175224 118 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms