Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Olfr895-201ENSMUST00000093864 951 ntBASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Gm12388-201ENSMUST00000119112 1887 ntBASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trim41Q5NCC3 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim41Q5NCC3 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim41Q5NCC3 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trim41Q5NCC3 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim41Q5NCC3 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC11.02□□□□□ -0.65
Trim41Q5NCC3 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim41Q5NCC3 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim41Q5NCC3 Atf1-ps-201ENSMUST00000120608 810 ntBASIC11.02□□□□□ -0.65
Trim41Q5NCC3 Gm11498-201ENSMUST00000120660 949 ntBASIC11.02□□□□□ -0.65
Trim41Q5NCC3 Gm25152-201ENSMUST00000157117 114 ntBASIC11.02□□□□□ -0.65
Trim41Q5NCC3 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC11.02□□□□□ -0.65
Trim41Q5NCC3 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trim41Q5NCC3 Gm4832-201ENSMUST00000182679 399 ntBASIC11.02□□□□□ -0.65
Trim41Q5NCC3 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC11.02□□□□□ -0.65
Trim41Q5NCC3 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim41Q5NCC3 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC11.02□□□□□ -0.65
Trim41Q5NCC3 Gm29334-201ENSMUST00000190334 357 ntBASIC11.02□□□□□ -0.65
Trim41Q5NCC3 Gm43043-201ENSMUST00000196579 412 ntBASIC11.02□□□□□ -0.65
Trim41Q5NCC3 Mir3970-201ENSMUST00000199287 90 ntBASIC11.02□□□□□ -0.65
Trim41Q5NCC3 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC11.02□□□□□ -0.65
Trim41Q5NCC3 Gm17999-201ENSMUST00000211568 542 ntBASIC11.02□□□□□ -0.65
Trim41Q5NCC3 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trim41Q5NCC3 Gm22365-201ENSMUST00000093750 117 ntBASIC11.02□□□□□ -0.65
Trim41Q5NCC3 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Trim41Q5NCC3 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim41Q5NCC3 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim41Q5NCC3 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim41Q5NCC3 Gm20287-201ENSMUST00000172848 2367 ntBASIC11.02□□□□□ -0.65
Trim41Q5NCC3 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Gm38388-201ENSMUST00000195569 1430 ntBASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Gm38124-201ENSMUST00000191710 2581 ntBASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC11.01□□□□□ -0.65
Trim41Q5NCC3 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Gm13220-201ENSMUST00000121535 508 ntBASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Gm25292-201ENSMUST00000122797 322 ntBASIC11.01□□□□□ -0.65
Trim41Q5NCC3 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Gm28257-201ENSMUST00000185244 463 ntBASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Gm37243-201ENSMUST00000193407 595 ntBASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Gm37743-201ENSMUST00000194645 376 ntBASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim41Q5NCC3 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Gm2628-201ENSMUST00000218019 426 ntBASIC11.01□□□□□ -0.65
Trim41Q5NCC3 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Gm44288-201ENSMUST00000205061 2795 ntBASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim41Q5NCC3 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim41Q5NCC3 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC11□□□□□ -0.65
Trim41Q5NCC3 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Trim41Q5NCC3 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm43266-201ENSMUST00000201049 1771 ntBASIC11□□□□□ -0.65
Trim41Q5NCC3 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm45290-201ENSMUST00000211177 3890 ntBASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm43395-201ENSMUST00000198717 2240 ntBASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm37107-201ENSMUST00000195326 2552 ntBASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm42841-201ENSMUST00000199806 1932 ntBASIC11□□□□□ -0.65
Trim41Q5NCC3 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm45457-201ENSMUST00000209931 3089 ntBASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm14835-201ENSMUST00000119039 315 ntBASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm22208-201ENSMUST00000122658 110 ntBASIC11□□□□□ -0.65
Trim41Q5NCC3 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim41Q5NCC3 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm20519-201ENSMUST00000173684 359 ntBASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm5527-201ENSMUST00000179821 642 ntBASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm8454-201ENSMUST00000196980 811 ntBASIC11□□□□□ -0.65
Trim41Q5NCC3 Igkv4-75-201ENSMUST00000197204 359 ntBASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms