Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm11486-201ENSMUST00000107322 478 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm14711-201ENSMUST00000117056 217 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm12245-201ENSMUST00000117266 357 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm7657-201ENSMUST00000118851 666 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm23993-201ENSMUST00000157478 144 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm24216-201ENSMUST00000158259 117 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm3008-201ENSMUST00000160566 571 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm17194-201ENSMUST00000164610 348 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm23450-201ENSMUST00000178285 91 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm18303-201ENSMUST00000190055 1176 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm37682-201ENSMUST00000191776 522 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm43054-201ENSMUST00000199495 884 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm44234-201ENSMUST00000204246 900 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm44954-201ENSMUST00000208513 227 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm45422-201ENSMUST00000211476 246 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm7128-201ENSMUST00000211639 533 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm17872-201ENSMUST00000222550 532 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 AC122034.1-201ENSMUST00000227641 595 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm5045-201ENSMUST00000027054 810 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 n-R5s86-201ENSMUST00000083215 119 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm26064-201ENSMUST00000083381 109 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm8734-201ENSMUST00000211669 1312 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm23910-201ENSMUST00000104597 132 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm15772-201ENSMUST00000118533 438 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm12231-201ENSMUST00000119447 695 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm11484-201ENSMUST00000119808 338 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Mup-ps28-201ENSMUST00000120686 289 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm8061-201ENSMUST00000122380 350 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm23837-201ENSMUST00000122656 286 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm5699-201ENSMUST00000152491 723 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm7609-204ENSMUST00000161424 461 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm26925-201ENSMUST00000182470 957 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Mir7687-201ENSMUST00000184722 59 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm28639-201ENSMUST00000191519 481 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm7496-201ENSMUST00000192573 1034 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm38214-201ENSMUST00000192581 988 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm37993-201ENSMUST00000195301 988 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm43768-201ENSMUST00000198380 1258 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 AC154296.3-201ENSMUST00000214427 712 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm22575-201ENSMUST00000082981 110 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Gm24763-201ENSMUST00000083688 190 ntBASIC4.82□□□□□ -1.64
Brf2Q3UAW9 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms