Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm7048-201ENSMUST00000199395 1891 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm25415-201ENSMUST00000104220 132 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm14769-201ENSMUST00000118590 432 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm14229-201ENSMUST00000121178 850 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm25808-201ENSMUST00000122784 284 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.16□□□□□ -1.58
Col8a1Q00780 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm23754-201ENSMUST00000157576 63 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm25598-201ENSMUST00000179031 107 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm22252-201ENSMUST00000179316 79 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm29596-201ENSMUST00000185710 385 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm28625-201ENSMUST00000188309 205 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm38015-201ENSMUST00000193048 188 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm37111-201ENSMUST00000193250 634 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC5.16□□□□□ -1.58
Col8a1Q00780 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm43624-201ENSMUST00000197368 180 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm45228-201ENSMUST00000206585 352 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm4587-201ENSMUST00000209135 637 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 AC134334.1-201ENSMUST00000214277 255 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.16□□□□□ -1.58
Col8a1Q00780 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col8a1Q00780 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC5.16□□□□□ -1.58
Col8a1Q00780 AC155929.1-201ENSMUST00000220217 1276 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.16□□□□□ -1.58
Col8a1Q00780 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col8a1Q00780 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm23614-201ENSMUST00000082598 107 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col8a1Q00780 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col8a1Q00780 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm43421-201ENSMUST00000200044 2905 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm42728-201ENSMUST00000202644 1552 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Col8a1Q00780 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Col8a1Q00780 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Col8a1Q00780 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col8a1Q00780 Gm43502-201ENSMUST00000200263 2596 ntBASIC5.15□□□□□ -1.58
Col8a1Q00780 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Col8a1Q00780 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col8a1Q00780 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.15□□□□□ -1.58
Col8a1Q00780 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col8a1Q00780 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col8a1Q00780 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.15□□□□□ -1.58
Col8a1Q00780 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Col8a1Q00780 Gm37911-201ENSMUST00000193099 1545 ntBASIC5.15□□□□□ -1.58
Col8a1Q00780 Gm23692-201ENSMUST00000101881 160 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm11914-201ENSMUST00000117094 507 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm11943-201ENSMUST00000119473 327 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm11484-201ENSMUST00000119808 338 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm14506-201ENSMUST00000121165 536 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm9587-201ENSMUST00000172449 454 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms