Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sox1P53783 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sox1P53783 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Sox1P53783 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sox1P53783 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Sox1P53783 Mir467g-201ENSMUST00000116906 120 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Gm11386-201ENSMUST00000117761 347 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Gm15490-201ENSMUST00000119894 387 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC6.26□□□□□ -1.41
Sox1P53783 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC6.26□□□□□ -1.41
Sox1P53783 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Gm23501-201ENSMUST00000157744 256 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Gm2343-201ENSMUST00000161177 1042 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.26□□□□□ -1.41
Sox1P53783 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Gm28579-201ENSMUST00000186143 369 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Gm18357-201ENSMUST00000188184 580 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Gm18553-201ENSMUST00000194152 634 ntBASIC6.26□□□□□ -1.41
Sox1P53783 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sox1P53783 Gm43513-201ENSMUST00000199779 1076 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Gm44132-201ENSMUST00000205142 151 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.26□□□□□ -1.41
Sox1P53783 Gm45596-201ENSMUST00000209279 434 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.26□□□□□ -1.41
Sox1P53783 Gm45409-201ENSMUST00000211486 252 ntBASIC6.26□□□□□ -1.41
Sox1P53783 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Gm18904-201ENSMUST00000218756 329 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Olfr923-204ENSMUST00000219798 1068 ntBASIC6.26□□□□□ -1.41
Sox1P53783 AC155929.1-201ENSMUST00000220217 1276 ntBASIC6.26□□□□□ -1.41
Sox1P53783 AC211878.2-201ENSMUST00000222486 488 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Gm3565-201ENSMUST00000222670 609 ntBASIC6.26□□□□□ -1.41
Sox1P53783 CT030705.1-201ENSMUST00000223971 533 ntBASIC6.26□□□□□ -1.41
Sox1P53783 AC124408.2-201ENSMUST00000228168 645 ntBASIC6.26□□□□□ -1.41
Sox1P53783 AC154846.2-201ENSMUST00000228805 424 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Sox1P53783 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Sox1P53783 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Sox1P53783 Gm25512-201ENSMUST00000083863 107 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sox1P53783 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC6.26□□□□□ -1.41
Sox1P53783 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sox1P53783 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
Sox1P53783 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Sox1P53783 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sox1P53783 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Sox1P53783 Gm42728-201ENSMUST00000202644 1552 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sox1P53783 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sox1P53783 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Sox1P53783 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Sox1P53783 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.26□□□□□ -1.41
Sox1P53783 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.26□□□□□ -1.41
Sox1P53783 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC6.26□□□□□ -1.41
Sox1P53783 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Sox1P53783 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sox1P53783 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sox1P53783 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sox1P53783 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sox1P53783 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sox1P53783 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox1P53783 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox1P53783 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sox1P53783 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox1P53783 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Sox1P53783 AC169985.1-201ENSMUST00000223648 2439 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox1P53783 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sox1P53783 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox1P53783 Gm25943-201ENSMUST00000103791 90 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Mir466b-7-201ENSMUST00000103804 88 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Mir466b-5-201ENSMUST00000103900 88 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox1P53783 Gm13491-201ENSMUST00000118267 235 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Gm13349-201ENSMUST00000118436 411 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Gm13627-201ENSMUST00000119700 706 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Gm23233-201ENSMUST00000157301 137 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Mir466b-4-201ENSMUST00000178801 90 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Gm25285-201ENSMUST00000178951 90 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Mir466b-6-201ENSMUST00000180061 90 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Mir466c-2-201ENSMUST00000180211 90 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Mir6539-201ENSMUST00000183732 110 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Gm29389-201ENSMUST00000191562 352 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Gm36998-201ENSMUST00000193205 704 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Gm43516-201ENSMUST00000196891 322 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Gm5306-201ENSMUST00000203325 757 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sox1P53783 Gm45739-201ENSMUST00000213094 388 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC6.25□□□□□ -1.41
Sox1P53783 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC6.25□□□□□ -1.41
Sox1P53783 AC104832.1-201ENSMUST00000222938 550 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Gm10064-201ENSMUST00000071235 399 ntBASIC6.25□□□□□ -1.41
Sox1P53783 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sox1P53783 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sox1P53783 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms