Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx2P43241 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx2P43241 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Cdx2P43241 Gm25595-201ENSMUST00000102273 97 ntBASIC4.52□□□□□ -1.69
Cdx2P43241 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC4.52□□□□□ -1.69
Cdx2P43241 Gm7312-201ENSMUST00000118798 469 ntBASIC4.52□□□□□ -1.69
Cdx2P43241 Gm12994-201ENSMUST00000119601 447 ntBASIC4.52□□□□□ -1.69
Cdx2P43241 Gm12189-201ENSMUST00000119779 912 ntBASIC4.52□□□□□ -1.69
Cdx2P43241 Gm11510-201ENSMUST00000120278 347 ntBASIC4.52□□□□□ -1.69
Cdx2P43241 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.52□□□□□ -1.69
Cdx2P43241 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.52□□□□□ -1.69
Cdx2P43241 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC4.52□□□□□ -1.69
Cdx2P43241 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Cdx2P43241 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Cdx2P43241 Gm27976-201ENSMUST00000183635 162 ntBASIC4.52□□□□□ -1.69
Cdx2P43241 Gm29228-201ENSMUST00000185489 418 ntBASIC4.52□□□□□ -1.69
Cdx2P43241 Gm9317-201ENSMUST00000197055 862 ntBASIC4.52□□□□□ -1.69
Cdx2P43241 Gm3189-201ENSMUST00000205595 832 ntBASIC4.52□□□□□ -1.69
Cdx2P43241 Gm7093-201ENSMUST00000223004 581 ntBASIC4.52□□□□□ -1.69
Cdx2P43241 Gm23099-201ENSMUST00000083454 139 ntBASIC4.52□□□□□ -1.69
Cdx2P43241 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx2P43241 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Cdx2P43241 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
Cdx2P43241 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.52□□□□□ -1.69
Cdx2P43241 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.52□□□□□ -1.69
Cdx2P43241 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.52□□□□□ -1.69
Cdx2P43241 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Cdx2P43241 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Cdx2P43241 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Cdx2P43241 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Cdx2P43241 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.51□□□□□ -1.69
Cdx2P43241 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.51□□□□□ -1.69
Cdx2P43241 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.51□□□□□ -1.69
Cdx2P43241 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Cdx2P43241 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.51□□□□□ -1.69
Cdx2P43241 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Cdx2P43241 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cdx2P43241 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdx2P43241 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdx2P43241 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdx2P43241 Gm22498-201ENSMUST00000104497 86 ntBASIC4.51□□□□□ -1.69
Cdx2P43241 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cdx2P43241 Gm14750-201ENSMUST00000118262 516 ntBASIC4.51□□□□□ -1.69
Cdx2P43241 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.51□□□□□ -1.69
Cdx2P43241 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.51□□□□□ -1.69
Cdx2P43241 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.51□□□□□ -1.69
Cdx2P43241 Gm24774-201ENSMUST00000157384 134 ntBASIC4.51□□□□□ -1.69
Cdx2P43241 Gm22536-201ENSMUST00000158171 134 ntBASIC4.51□□□□□ -1.69
Cdx2P43241 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.51□□□□□ -1.69
Cdx2P43241 Gm18953-201ENSMUST00000175694 300 ntBASIC4.51□□□□□ -1.69
Cdx2P43241 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdx2P43241 Gm25942-201ENSMUST00000180080 110 ntBASIC4.51□□□□□ -1.69
Cdx2P43241 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC4.51□□□□□ -1.69
Cdx2P43241 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC4.51□□□□□ -1.69
Cdx2P43241 Gm37682-201ENSMUST00000191776 522 ntBASIC4.51□□□□□ -1.69
Cdx2P43241 Gm37700-201ENSMUST00000192617 965 ntBASIC4.51□□□□□ -1.69
Cdx2P43241 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC4.51□□□□□ -1.69
Cdx2P43241 Gm43828-201ENSMUST00000196890 639 ntBASIC4.51□□□□□ -1.69
Cdx2P43241 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cdx2P43241 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.51□□□□□ -1.69
Cdx2P43241 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.51□□□□□ -1.69
Cdx2P43241 Gm7807-201ENSMUST00000212475 578 ntBASIC4.51□□□□□ -1.69
Cdx2P43241 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cdx2P43241 Gm18997-201ENSMUST00000216353 822 ntBASIC4.51□□□□□ -1.69
Cdx2P43241 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC4.51□□□□□ -1.69
Cdx2P43241 AC132433.1-201ENSMUST00000221553 1101 ntBASIC4.51□□□□□ -1.69
Cdx2P43241 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.51□□□□□ -1.69
Cdx2P43241 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Cdx2P43241 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdx2P43241 Snord59a-201ENSMUST00000082844 74 ntBASIC4.51□□□□□ -1.69
Cdx2P43241 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdx2P43241 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Cdx2P43241 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Cdx2P43241 Gm44220-201ENSMUST00000203784 2487 ntBASIC4.51□□□□□ -1.69
Cdx2P43241 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Cdx2P43241 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.51□□□□□ -1.69
Cdx2P43241 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Cdx2P43241 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
Cdx2P43241 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
Cdx2P43241 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Cdx2P43241 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx2P43241 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Cdx2P43241 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx2P43241 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx2P43241 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx2P43241 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
Cdx2P43241 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx2P43241 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx2P43241 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
Cdx2P43241 Gm14753-201ENSMUST00000118503 246 ntBASIC4.5□□□□□ -1.69
Cdx2P43241 Gm25292-201ENSMUST00000122797 322 ntBASIC4.5□□□□□ -1.69
Cdx2P43241 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.5□□□□□ -1.69
Cdx2P43241 Gm23115-201ENSMUST00000158480 108 ntBASIC4.5□□□□□ -1.69
Cdx2P43241 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx2P43241 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Cdx2P43241 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC4.5□□□□□ -1.69
Cdx2P43241 Gm18177-201ENSMUST00000188373 404 ntBASIC4.5□□□□□ -1.69
Cdx2P43241 Gm29479-201ENSMUST00000190352 455 ntBASIC4.5□□□□□ -1.69
Cdx2P43241 Gm17956-201ENSMUST00000199931 838 ntBASIC4.5□□□□□ -1.69
Cdx2P43241 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms