Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC5.76□□□□□ -1.49
Traf1P39428 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.76□□□□□ -1.49
Traf1P39428 Gm9687-201ENSMUST00000189312 602 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Gm36998-201ENSMUST00000193205 704 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Gm38011-201ENSMUST00000193312 279 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Gm5842-201ENSMUST00000195073 622 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Gm32308-201ENSMUST00000203053 280 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Gm18791-201ENSMUST00000204611 726 ntBASIC5.76□□□□□ -1.49
Traf1P39428 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.76□□□□□ -1.49
Traf1P39428 Gm8264-201ENSMUST00000217801 465 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Gm8158-201ENSMUST00000219220 465 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC5.76□□□□□ -1.49
Traf1P39428 Gm8112-201ENSMUST00000219637 465 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.76□□□□□ -1.49
Traf1P39428 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Ap3m1-208ENSMUST00000224016 764 ntBASIC5.76□□□□□ -1.49
Traf1P39428 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Gm5045-201ENSMUST00000027054 810 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Traf1P39428 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Traf1P39428 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Traf1P39428 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Traf1P39428 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Traf1P39428 Gm42968-201ENSMUST00000198578 1372 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Traf1P39428 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Traf1P39428 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.76□□□□□ -1.49
Traf1P39428 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Traf1P39428 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Traf1P39428 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Traf1P39428 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Traf1P39428 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Traf1P39428 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Traf1P39428 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Traf1P39428 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.75□□□□□ -1.49
Traf1P39428 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Traf1P39428 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.75□□□□□ -1.49
Traf1P39428 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Traf1P39428 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Traf1P39428 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.75□□□□□ -1.49
Traf1P39428 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Traf1P39428 Gm15772-201ENSMUST00000118533 438 ntBASIC5.75□□□□□ -1.49
Traf1P39428 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Traf1P39428 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC5.75□□□□□ -1.49
Traf1P39428 Gm3053-201ENSMUST00000161709 616 ntBASIC5.75□□□□□ -1.49
Traf1P39428 Gm18150-201ENSMUST00000195341 645 ntBASIC5.75□□□□□ -1.49
Traf1P39428 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC5.75□□□□□ -1.49
Traf1P39428 Gm44648-201ENSMUST00000208267 329 ntBASIC5.75□□□□□ -1.49
Traf1P39428 Gm45690-201ENSMUST00000210775 246 ntBASIC5.75□□□□□ -1.49
Traf1P39428 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC5.75□□□□□ -1.49
Traf1P39428 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Traf1P39428 Gm3086-202ENSMUST00000221248 310 ntBASIC5.75□□□□□ -1.49
Traf1P39428 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.75□□□□□ -1.49
Traf1P39428 Gm5215-201ENSMUST00000054380 405 ntBASIC5.75□□□□□ -1.49
Traf1P39428 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC5.75□□□□□ -1.49
Traf1P39428 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Traf1P39428 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Traf1P39428 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Traf1P39428 Gm25134-201ENSMUST00000082646 160 ntBASIC5.75□□□□□ -1.49
Traf1P39428 Gm23302-201ENSMUST00000082710 100 ntBASIC5.75□□□□□ -1.49
Traf1P39428 Mir99a-201ENSMUST00000083596 65 ntBASIC5.75□□□□□ -1.49
Traf1P39428 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Traf1P39428 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Traf1P39428 Gm42615-201ENSMUST00000197704 1820 ntBASIC5.75□□□□□ -1.49
Traf1P39428 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.75□□□□□ -1.49
Traf1P39428 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.75□□□□□ -1.49
Traf1P39428 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Traf1P39428 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.75□□□□□ -1.49
Traf1P39428 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Traf1P39428 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Traf1P39428 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.75□□□□□ -1.49
Traf1P39428 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Traf1P39428 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
Traf1P39428 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Traf1P39428 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Traf1P39428 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Traf1P39428 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Traf1P39428 AC174797.3-203ENSMUST00000225749 2078 ntBASIC5.75□□□□□ -1.49
Traf1P39428 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Traf1P39428 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Traf1P39428 Gm2033-201ENSMUST00000210753 2287 ntBASIC5.74□□□□□ -1.49
Traf1P39428 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.74□□□□□ -1.49
Traf1P39428 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Traf1P39428 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Traf1P39428 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.74□□□□□ -1.49
Traf1P39428 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.74□□□□□ -1.49
Traf1P39428 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Traf1P39428 Gm22020-201ENSMUST00000104358 136 ntBASIC5.74□□□□□ -1.49
Traf1P39428 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Traf1P39428 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Traf1P39428 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.74□□□□□ -1.49
Traf1P39428 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Traf1P39428 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Traf1P39428 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC5.74□□□□□ -1.49
Traf1P39428 Gm37030-201ENSMUST00000194254 295 ntBASIC5.74□□□□□ -1.49
Traf1P39428 Gm37659-201ENSMUST00000194574 111 ntBASIC5.74□□□□□ -1.49
Traf1P39428 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.74□□□□□ -1.49
Traf1P39428 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.74□□□□□ -1.49
Traf1P39428 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms