Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd9P28357 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.11□□□□□ -1.43
Hoxd9P28357 Gm19202-201ENSMUST00000198096 808 ntBASIC6.11□□□□□ -1.43
Hoxd9P28357 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.11□□□□□ -1.43
Hoxd9P28357 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC6.11□□□□□ -1.43
Hoxd9P28357 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC6.11□□□□□ -1.43
Hoxd9P28357 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd9P28357 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd9P28357 AC162387.1-201ENSMUST00000213369 213 ntBASIC6.11□□□□□ -1.43
Hoxd9P28357 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC6.11□□□□□ -1.43
Hoxd9P28357 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd9P28357 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Hoxd9P28357 AC161572.1-201ENSMUST00000227486 640 ntBASIC6.11□□□□□ -1.43
Hoxd9P28357 AC133203.1-201ENSMUST00000228241 301 ntBASIC6.11□□□□□ -1.43
Hoxd9P28357 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
Hoxd9P28357 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hoxd9P28357 Gm22749-201ENSMUST00000082490 107 ntBASIC6.11□□□□□ -1.43
Hoxd9P28357 Gm24856-201ENSMUST00000082809 107 ntBASIC6.11□□□□□ -1.43
Hoxd9P28357 Gm24037-201ENSMUST00000082871 180 ntBASIC6.11□□□□□ -1.43
Hoxd9P28357 Gm25258-201ENSMUST00000083049 107 ntBASIC6.11□□□□□ -1.43
Hoxd9P28357 Gm24535-201ENSMUST00000083140 107 ntBASIC6.11□□□□□ -1.43
Hoxd9P28357 Gm22352-201ENSMUST00000083917 107 ntBASIC6.11□□□□□ -1.43
Hoxd9P28357 Gm3867-201ENSMUST00000086108 279 ntBASIC6.11□□□□□ -1.43
Hoxd9P28357 Gm10205-201ENSMUST00000087431 234 ntBASIC6.11□□□□□ -1.43
Hoxd9P28357 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.11□□□□□ -1.43
Hoxd9P28357 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd9P28357 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd9P28357 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd9P28357 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd9P28357 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd9P28357 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd9P28357 AC121844.2-201ENSMUST00000219067 2066 ntBASIC6.11□□□□□ -1.43
Hoxd9P28357 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd9P28357 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd9P28357 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd9P28357 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd9P28357 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.11□□□□□ -1.43
Hoxd9P28357 Gm43924-201ENSMUST00000204851 1736 ntBASIC6.11□□□□□ -1.43
Hoxd9P28357 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Hoxd9P28357 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Hoxd9P28357 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd9P28357 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Hoxd9P28357 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Hoxd9P28357 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd9P28357 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd9P28357 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd9P28357 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd9P28357 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd9P28357 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Hoxd9P28357 n-R5s82-201ENSMUST00000104213 109 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm22019-201ENSMUST00000104359 96 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm8250-201ENSMUST00000117398 774 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm13170-201ENSMUST00000119716 643 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm12369-201ENSMUST00000121343 942 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm12451-201ENSMUST00000121636 633 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm14804-201ENSMUST00000122322 508 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm25827-201ENSMUST00000157089 107 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm25982-201ENSMUST00000157920 101 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm23071-201ENSMUST00000158242 115 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
Hoxd9P28357 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm25525-201ENSMUST00000177701 107 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm26178-201ENSMUST00000177706 107 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm26465-201ENSMUST00000178517 107 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm24317-201ENSMUST00000178536 107 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm25021-201ENSMUST00000179184 107 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm22995-201ENSMUST00000179670 107 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm24424-201ENSMUST00000179714 107 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm24389-201ENSMUST00000179962 107 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm25672-201ENSMUST00000180111 107 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm17929-201ENSMUST00000186851 627 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm29163-201ENSMUST00000188029 107 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm38046-201ENSMUST00000192733 550 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm5983-201ENSMUST00000197739 770 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm43114-201ENSMUST00000198298 343 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Ighv1-83-201ENSMUST00000199643 351 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm44265-201ENSMUST00000203631 465 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxd9P28357 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC6.1□□□□□ -1.43
Hoxd9P28357 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxd9P28357 AC154552.4-201ENSMUST00000222171 151 ntBASIC6.1□□□□□ -1.43
Hoxd9P28357 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms