Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC3.86□□□□□ -1.79
Sdc1P18828 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Sdc1P18828 Gm28872-201ENSMUST00000191518 158 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Gm37243-201ENSMUST00000193407 595 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Gm38008-201ENSMUST00000195333 518 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Gm42459-201ENSMUST00000199679 742 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Sdc1P18828 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Gm44683-201ENSMUST00000209088 484 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Gm45474-201ENSMUST00000209471 408 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Sdc1P18828 Gm6477-201ENSMUST00000217098 764 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 AC104906.1-201ENSMUST00000218122 913 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 AC110381.1-201ENSMUST00000218987 586 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 AC155266.1-201ENSMUST00000220762 904 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC3.86□□□□□ -1.79
Sdc1P18828 AC154305.3-201ENSMUST00000224661 552 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Sdc1P18828 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Sdc1P18828 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC3.86□□□□□ -1.79
Sdc1P18828 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Sdc1P18828 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Sdc1P18828 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Sdc1P18828 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Sdc1P18828 AC136019.1-201ENSMUST00000226503 1412 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Gm43662-201ENSMUST00000198310 2271 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Sdc1P18828 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Sdc1P18828 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Sdc1P18828 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
Sdc1P18828 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
Sdc1P18828 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Sdc1P18828 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Sdc1P18828 Gm37964-201ENSMUST00000192459 4905 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Sdc1P18828 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Sdc1P18828 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC3.85□□□□□ -1.79
Sdc1P18828 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Sdc1P18828 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Sdc1P18828 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Sdc1P18828 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Sdc1P18828 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 Gm12448-201ENSMUST00000118852 655 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 Gm13000-201ENSMUST00000120937 496 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Sdc1P18828 Gm25389-201ENSMUST00000157340 286 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC3.85□□□□□ -1.79
Sdc1P18828 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC3.85□□□□□ -1.79
Sdc1P18828 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC3.85□□□□□ -1.79
Sdc1P18828 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC3.85□□□□□ -1.79
Sdc1P18828 Gm28830-201ENSMUST00000188192 213 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 Gm29376-201ENSMUST00000189357 835 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC3.85□□□□□ -1.79
Sdc1P18828 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Sdc1P18828 Gm38015-201ENSMUST00000193048 188 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC3.85□□□□□ -1.79
Sdc1P18828 Gm42522-201ENSMUST00000196071 255 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 Gm5660-201ENSMUST00000197453 1149 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC3.85□□□□□ -1.79
Sdc1P18828 Gm43144-201ENSMUST00000198256 485 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 Gm43849-201ENSMUST00000201086 215 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 Gm43124-201ENSMUST00000201878 278 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 Gm43090-201ENSMUST00000202459 314 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Sdc1P18828 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC3.85□□□□□ -1.79
Sdc1P18828 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC3.85□□□□□ -1.79
Sdc1P18828 Gm19366-201ENSMUST00000206996 156 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 AC154296.3-201ENSMUST00000214427 712 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 AC166263.1-201ENSMUST00000218586 238 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 AC164295.1-201ENSMUST00000224861 186 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 AC159231.1-201ENSMUST00000225365 226 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 Ear-ps9-202ENSMUST00000226796 245 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 AC098742.1-201ENSMUST00000227945 373 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Sdc1P18828 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Sdc1P18828 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Sdc1P18828 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Sdc1P18828 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Sdc1P18828 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Sdc1P18828 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Sdc1P18828 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Sdc1P18828 Gm24166-201ENSMUST00000082724 135 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Sdc1P18828 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Sdc1P18828 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Sdc1P18828 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Sdc1P18828 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Sdc1P18828 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Sdc1P18828 AC131743.1-201ENSMUST00000222138 4024 ntBASIC3.85□□□□□ -1.79
Sdc1P18828 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Sdc1P18828 Gm42616-201ENSMUST00000198989 4184 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Sdc1P18828 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC3.84□□□□□ -1.79
Sdc1P18828 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Sdc1P18828 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Sdc1P18828 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms