Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.07□□□□□ -1.76
Cdx1P18111 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Cdx1P18111 Snora81-201ENSMUST00000157310 178 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm23499-201ENSMUST00000157736 268 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm15838-201ENSMUST00000161575 180 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm17142-201ENSMUST00000164933 645 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cdx1P18111 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.07□□□□□ -1.76
Cdx1P18111 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cdx1P18111 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Cdx1P18111 Gm22859-201ENSMUST00000174978 122 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm15143-201ENSMUST00000178180 714 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cdx1P18111 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Cdx1P18111 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC4.07□□□□□ -1.76
Cdx1P18111 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cdx1P18111 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Cdx1P18111 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.07□□□□□ -1.76
Cdx1P18111 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm38283-201ENSMUST00000193041 695 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm38011-201ENSMUST00000193312 279 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm44456-201ENSMUST00000196554 89 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC4.07□□□□□ -1.76
Cdx1P18111 Gm44485-201ENSMUST00000199569 137 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Cdx1P18111 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC4.07□□□□□ -1.76
Cdx1P18111 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC4.07□□□□□ -1.76
Cdx1P18111 Gm45689-201ENSMUST00000210522 133 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.07□□□□□ -1.76
Cdx1P18111 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Cdx1P18111 Gm19168-201ENSMUST00000218804 1091 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm6049-201ENSMUST00000222369 458 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 AC154636.1-201ENSMUST00000223226 126 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Cdx1P18111 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm7887-201ENSMUST00000056948 537 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cdx1P18111 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cdx1P18111 Gm6462-201ENSMUST00000081488 304 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Cdx1P18111 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Cdx1P18111 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Cdx1P18111 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Cdx1P18111 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Cdx1P18111 Neat1-201ENSMUST00000173672 20771 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Cdx1P18111 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Cdx1P18111 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
Cdx1P18111 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Cdx1P18111 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Cdx1P18111 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Cdx1P18111 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Cdx1P18111 AC187103.2-201ENSMUST00000223605 1617 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Cdx1P18111 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Cdx1P18111 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Cdx1P18111 AC136019.1-201ENSMUST00000226503 1412 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Cdx1P18111 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Cdx1P18111 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Cdx1P18111 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Cdx1P18111 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Cdx1P18111 Gm12760-201ENSMUST00000117861 482 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Gm6565-201ENSMUST00000121217 438 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Gm13366-201ENSMUST00000122198 970 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Cdx1P18111 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC4.06□□□□□ -1.76
Cdx1P18111 Gm26069-201ENSMUST00000157497 277 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Gm25603-201ENSMUST00000158361 105 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Cdx1P18111 Gm3216-201ENSMUST00000166927 486 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Gm6632-201ENSMUST00000168425 954 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Gm3141-201ENSMUST00000168726 499 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC4.06□□□□□ -1.76
Cdx1P18111 Gm27039-201ENSMUST00000182438 962 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Cdx1P18111 Gm29474-201ENSMUST00000187688 379 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Gm37436-201ENSMUST00000193842 1085 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Cdx1P18111 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Cdx1P18111 Gm7990-201ENSMUST00000212126 593 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 AC158803.2-201ENSMUST00000219452 679 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC4.06□□□□□ -1.76
Cdx1P18111 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC4.06□□□□□ -1.76
Cdx1P18111 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Cdx1P18111 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.06□□□□□ -1.76
Cdx1P18111 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Cdx1P18111 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Cdx1P18111 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Cdx1P18111 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Cdx1P18111 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms