Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col1a1P11087 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.41□□□□□ -1.54
Col1a1P11087 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col1a1P11087 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col1a1P11087 Gm37936-201ENSMUST00000194647 1322 ntBASIC5.41□□□□□ -1.54
Col1a1P11087 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Col1a1P11087 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col1a1P11087 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.41□□□□□ -1.54
Col1a1P11087 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col1a1P11087 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.4□□□□□ -1.54
Col1a1P11087 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col1a1P11087 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col1a1P11087 Gm24792-201ENSMUST00000104286 128 ntBASIC5.4□□□□□ -1.54
Col1a1P11087 Gm14369-201ENSMUST00000121355 285 ntBASIC5.4□□□□□ -1.54
Col1a1P11087 Gm12755-201ENSMUST00000122297 282 ntBASIC5.4□□□□□ -1.54
Col1a1P11087 Gm44354-201ENSMUST00000196017 143 ntBASIC5.4□□□□□ -1.54
Col1a1P11087 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC5.4□□□□□ -1.54
Col1a1P11087 Gm44054-201ENSMUST00000203814 372 ntBASIC5.4□□□□□ -1.54
Col1a1P11087 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col1a1P11087 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col1a1P11087 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col1a1P11087 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.4□□□□□ -1.55
Col1a1P11087 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.4□□□□□ -1.55
Col1a1P11087 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.4□□□□□ -1.55
Col1a1P11087 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col1a1P11087 Gm17137-201ENSMUST00000164106 4371 ntBASIC5.4□□□□□ -1.55
Col1a1P11087 Gm43781-201ENSMUST00000197634 2681 ntBASIC5.4□□□□□ -1.55
Col1a1P11087 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Col1a1P11087 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
Col1a1P11087 Gm12252-201ENSMUST00000119517 219 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Gm12704-201ENSMUST00000119789 464 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Gm14725-201ENSMUST00000120324 828 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Gm12486-201ENSMUST00000120887 541 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Gm14916-201ENSMUST00000121904 204 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Gm5924-201ENSMUST00000132554 871 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC5.39□□□□□ -1.55
Col1a1P11087 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC5.39□□□□□ -1.55
Col1a1P11087 Gm25058-201ENSMUST00000157365 128 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Gm8790-201ENSMUST00000194108 322 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Gm17780-201ENSMUST00000207142 612 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col1a1P11087 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC5.39□□□□□ -1.55
Col1a1P11087 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col1a1P11087 Gm18510-201ENSMUST00000219335 1096 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col1a1P11087 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col1a1P11087 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Col1a1P11087 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.39□□□□□ -1.55
Col1a1P11087 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col1a1P11087 Gm43844-201ENSMUST00000202926 5605 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col1a1P11087 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col1a1P11087 Gm3675-201ENSMUST00000175904 1653 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col1a1P11087 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Col1a1P11087 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col1a1P11087 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col1a1P11087 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col1a1P11087 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col1a1P11087 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col1a1P11087 Gm12719-201ENSMUST00000118859 241 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Gm5391-201ENSMUST00000121155 613 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col1a1P11087 Gm23554-201ENSMUST00000157818 110 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col1a1P11087 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col1a1P11087 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Gm21461-201ENSMUST00000200382 863 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC5.39□□□□□ -1.55
Col1a1P11087 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.39□□□□□ -1.55
Col1a1P11087 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC5.39□□□□□ -1.55
Col1a1P11087 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC5.39□□□□□ -1.55
Col1a1P11087 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col1a1P11087 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col1a1P11087 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Col1a1P11087 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.38□□□□□ -1.55
Col1a1P11087 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Col1a1P11087 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col1a1P11087 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Col1a1P11087 Gm45211-201ENSMUST00000206208 2650 ntBASIC5.38□□□□□ -1.55
Col1a1P11087 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5.38□□□□□ -1.55
Col1a1P11087 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.38□□□□□ -1.55
Col1a1P11087 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Col1a1P11087 Gm9597-202ENSMUST00000227632 1387 ntBASIC5.38□□□□□ -1.55
Col1a1P11087 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col1a1P11087 Mir551b-201ENSMUST00000102165 98 ntBASIC5.38□□□□□ -1.55
Col1a1P11087 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Col1a1P11087 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col1a1P11087 Gm13484-201ENSMUST00000120738 412 ntBASIC5.38□□□□□ -1.55
Col1a1P11087 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col1a1P11087 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col1a1P11087 Gm20657-201ENSMUST00000177079 515 ntBASIC5.38□□□□□ -1.55
Col1a1P11087 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.38□□□□□ -1.55
Col1a1P11087 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms