Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm15905-201ENSMUST00000137042 298 ntBASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Gm23855-201ENSMUST00000158377 135 ntBASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.12□□□□□ -1.59
Chmp6P0C0A3 AC121986.1-201ENSMUST00000218588 781 ntBASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Chmp6P0C0A3 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC5.12□□□□□ -1.59
Chmp6P0C0A3 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.12□□□□□ -1.59
Chmp6P0C0A3 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC5.12□□□□□ -1.59
Chmp6P0C0A3 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Gm24188-201ENSMUST00000157980 108 ntBASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Gm23513-201ENSMUST00000158181 133 ntBASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Gm5066-201ENSMUST00000188479 822 ntBASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Gm28389-201ENSMUST00000190090 697 ntBASIC5.11□□□□□ -1.59
Chmp6P0C0A3 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Gm37973-201ENSMUST00000195767 1289 ntBASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Gm44038-201ENSMUST00000203952 889 ntBASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Gm18997-201ENSMUST00000216353 822 ntBASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Gm22220-201ENSMUST00000082671 149 ntBASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.11□□□□□ -1.59
Chmp6P0C0A3 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Chmp6P0C0A3 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Gm16128-201ENSMUST00000117855 626 ntBASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Gm13491-201ENSMUST00000118267 235 ntBASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Gm12231-201ENSMUST00000119447 695 ntBASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Gm14957-201ENSMUST00000121069 817 ntBASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Gm9687-201ENSMUST00000189312 602 ntBASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Gm43350-201ENSMUST00000196382 711 ntBASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Gm42666-201ENSMUST00000201954 152 ntBASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Gm43596-201ENSMUST00000202818 884 ntBASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC5.1□□□□□ -1.59
Chmp6P0C0A3 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Chmp6P0C0A3 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Chmp6P0C0A3 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.09□□□□□ -1.59
Chmp6P0C0A3 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5.09□□□□□ -1.59
Chmp6P0C0A3 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.09□□□□□ -1.59
Chmp6P0C0A3 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Chmp6P0C0A3 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Chmp6P0C0A3 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Chmp6P0C0A3 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Chmp6P0C0A3 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Chmp6P0C0A3 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.09□□□□□ -1.59
Chmp6P0C0A3 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.09□□□□□ -1.59
Chmp6P0C0A3 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Chmp6P0C0A3 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
Chmp6P0C0A3 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 105.1 ms