Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm12294-201ENSMUST00000119723 490 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm22076-201ENSMUST00000158601 84 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm6264-201ENSMUST00000160802 624 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm9613-201ENSMUST00000171662 196 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm24081-201ENSMUST00000175177 125 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm21809-201ENSMUST00000178495 468 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm17412-201ENSMUST00000179261 468 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm4322-201ENSMUST00000191094 336 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm42805-201ENSMUST00000196158 276 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm45157-201ENSMUST00000208729 401 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 AC073947.3-201ENSMUST00000215576 766 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm8681-201ENSMUST00000219115 618 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 CT009713.9-201ENSMUST00000223604 389 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 AC133598.3-204ENSMUST00000224260 767 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 AC105324.1-201ENSMUST00000227844 386 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 n-R5s27-201ENSMUST00000093699 119 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm24430-201ENSMUST00000104077 104 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Lipe-203ENSMUST00000105177 1251 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm13245-201ENSMUST00000119646 260 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm14732-201ENSMUST00000121372 545 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm24635-201ENSMUST00000122712 128 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm26468-201ENSMUST00000158644 106 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm16298-201ENSMUST00000161107 420 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm24103-201ENSMUST00000174930 77 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm21737-201ENSMUST00000178112 664 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm20874-201ENSMUST00000178356 663 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm21744-201ENSMUST00000178403 662 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm20901-201ENSMUST00000180177 664 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Mir6921-201ENSMUST00000183719 80 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm28474-201ENSMUST00000188501 315 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm28090-201ENSMUST00000189458 664 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm21647-201ENSMUST00000189755 664 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm2367-201ENSMUST00000192374 472 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Ighv1-29-201ENSMUST00000194116 342 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm18553-201ENSMUST00000194152 634 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.36□□□□□ -1.55
Pcdh1F7BJK1 Gm44856-201ENSMUST00000206639 304 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms