Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.62□□□□□ -1.51
Clip3B9EHT4 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Clip3B9EHT4 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm13770-201ENSMUST00000117149 305 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm14534-201ENSMUST00000120045 357 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm13902-201ENSMUST00000120168 605 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm14238-201ENSMUST00000120227 323 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm8545-201ENSMUST00000120692 801 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm12494-201ENSMUST00000121684 521 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm25782-201ENSMUST00000122526 289 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm25826-201ENSMUST00000157090 137 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm25150-201ENSMUST00000157121 60 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm24965-201ENSMUST00000157922 106 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm25459-201ENSMUST00000157953 114 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm23662-201ENSMUST00000158046 111 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm24731-201ENSMUST00000158227 131 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm25445-201ENSMUST00000158996 299 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm5473-201ENSMUST00000179326 642 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Mir7653-201ENSMUST00000184358 61 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Mir7008-201ENSMUST00000184398 63 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm5058-201ENSMUST00000187331 463 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm29475-201ENSMUST00000190767 312 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm18444-201ENSMUST00000191239 629 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Ighv1-41-201ENSMUST00000194414 329 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm37341-201ENSMUST00000194680 371 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm5027-201ENSMUST00000206700 375 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Clip3B9EHT4 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm18729-201ENSMUST00000217230 621 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 AC122357.2-201ENSMUST00000220732 1525 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 AC091783.2-201ENSMUST00000224626 740 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 AC156790.3-201ENSMUST00000226200 254 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 AC120375.2-201ENSMUST00000226532 1853 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 AC107453.2-201ENSMUST00000227714 655 ntBASIC5.61□□□□□ -1.51
Clip3B9EHT4 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clip3B9EHT4 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Clip3B9EHT4 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clip3B9EHT4 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clip3B9EHT4 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms