Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Gm14995-201ENSMUST00000117135 391 ntBASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Gm11631-201ENSMUST00000119220 156 ntBASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Gm13787-201ENSMUST00000120422 168 ntBASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Gm11910-201ENSMUST00000121624 432 ntBASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Gm22343-201ENSMUST00000122648 286 ntBASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Gm23673-201ENSMUST00000157474 298 ntBASIC4.51□□□□□ -1.69
Cdc40Q9DC48 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Mir7031-201ENSMUST00000183860 65 ntBASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Gm9569-201ENSMUST00000187492 787 ntBASIC4.51□□□□□ -1.69
Cdc40Q9DC48 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Gm36983-201ENSMUST00000192280 1102 ntBASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Gm42694-201ENSMUST00000196951 358 ntBASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.51□□□□□ -1.69
Cdc40Q9DC48 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Gm44261-201ENSMUST00000203337 209 ntBASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Gm8999-201ENSMUST00000204951 969 ntBASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Gm5215-201ENSMUST00000054380 405 ntBASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Gm22350-201ENSMUST00000083924 156 ntBASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm15394-201ENSMUST00000119656 1308 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm42598-201ENSMUST00000200110 2437 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm25419-201ENSMUST00000104215 191 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm26376-201ENSMUST00000104784 110 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm11822-201ENSMUST00000119177 415 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm12849-201ENSMUST00000120013 739 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm12332-201ENSMUST00000121397 922 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm15227-201ENSMUST00000121844 399 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm24931-201ENSMUST00000158324 107 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm22857-201ENSMUST00000174969 134 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm37884-201ENSMUST00000191857 818 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm18426-201ENSMUST00000191874 973 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm43596-201ENSMUST00000202818 884 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm44259-201ENSMUST00000204996 298 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm43428-201ENSMUST00000200108 3845 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm10727-201ENSMUST00000197107 1602 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm43784-201ENSMUST00000202922 2436 ntBASIC4.5□□□□□ -1.69
Cdc40Q9DC48 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 195.5 ms