Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Gm24578-201ENSMUST00000103970 129 ntBASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Gm24235-201ENSMUST00000104319 129 ntBASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Gm15480-201ENSMUST00000120442 519 ntBASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Gm12748-201ENSMUST00000120763 504 ntBASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Gm13808-201ENSMUST00000121353 184 ntBASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Gm16471-201ENSMUST00000121940 618 ntBASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Gm23327-201ENSMUST00000157420 78 ntBASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Gm24773-201ENSMUST00000158513 99 ntBASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Mir7012-201ENSMUST00000183900 64 ntBASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Mir6400-201ENSMUST00000184870 92 ntBASIC6.06□□□□□ -1.44
Vps53Q8CCB4 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Gm2979-201ENSMUST00000193442 463 ntBASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Mir1892-201ENSMUST00000197752 80 ntBASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Gm44088-201ENSMUST00000204595 237 ntBASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Gm4574-201ENSMUST00000207804 542 ntBASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 AC154626.1-201ENSMUST00000226070 311 ntBASIC6.06□□□□□ -1.44
Vps53Q8CCB4 AC158981.3-201ENSMUST00000226844 1024 ntBASIC6.06□□□□□ -1.44
Vps53Q8CCB4 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Vps53Q8CCB4 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Gm7869-201ENSMUST00000121457 1322 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Gm25595-201ENSMUST00000102273 97 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Mup-ps14-201ENSMUST00000118437 532 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Mup-ps10-201ENSMUST00000119626 556 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Gm15828-201ENSMUST00000119911 522 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Gm13077-201ENSMUST00000121941 484 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Mir6963-201ENSMUST00000183535 71 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Gm21803-201ENSMUST00000188897 693 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Gm19029-201ENSMUST00000189923 564 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Gm18303-201ENSMUST00000190055 1176 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Gm28567-201ENSMUST00000190270 693 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Ighv1-3-201ENSMUST00000192764 302 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Gm37044-201ENSMUST00000193531 693 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Gm38369-201ENSMUST00000195101 693 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Gm20997-201ENSMUST00000205148 231 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Gm44623-201ENSMUST00000207934 434 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Gm19987-201ENSMUST00000216339 499 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 AC154436.2-201ENSMUST00000227408 208 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Olfr192-201ENSMUST00000080251 925 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Vps53Q8CCB4 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm37779-201ENSMUST00000194221 3380 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 116.3 ms