Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm22269-201ENSMUST00000104002 130 ntBASIC4.14□□□□□ -1.75
Col6a6Q8C6K9 Gm12820-201ENSMUST00000119233 342 ntBASIC4.14□□□□□ -1.75
Col6a6Q8C6K9 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC4.14□□□□□ -1.75
Col6a6Q8C6K9 Gm8051-201ENSMUST00000120464 466 ntBASIC4.14□□□□□ -1.75
Col6a6Q8C6K9 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC4.14□□□□□ -1.75
Col6a6Q8C6K9 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col6a6Q8C6K9 Gm26347-201ENSMUST00000157526 131 ntBASIC4.14□□□□□ -1.75
Col6a6Q8C6K9 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col6a6Q8C6K9 Gm43405-201ENSMUST00000198642 337 ntBASIC4.14□□□□□ -1.75
Col6a6Q8C6K9 Gm9057-201ENSMUST00000198791 296 ntBASIC4.14□□□□□ -1.75
Col6a6Q8C6K9 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col6a6Q8C6K9 Gm45539-201ENSMUST00000210313 428 ntBASIC4.14□□□□□ -1.75
Col6a6Q8C6K9 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col6a6Q8C6K9 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC4.14□□□□□ -1.75
Col6a6Q8C6K9 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Col6a6Q8C6K9 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Col6a6Q8C6K9 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.14□□□□□ -1.75
Col6a6Q8C6K9 Gm10705-201ENSMUST00000098980 461 ntBASIC4.14□□□□□ -1.75
Col6a6Q8C6K9 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col6a6Q8C6K9 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col6a6Q8C6K9 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Gm23782-201ENSMUST00000157939 120 ntBASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Gm26404-201ENSMUST00000158498 109 ntBASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Gm28654-201ENSMUST00000189801 379 ntBASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Gm37097-201ENSMUST00000193676 336 ntBASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Gm29793-201ENSMUST00000202874 460 ntBASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Gm5750-201ENSMUST00000218711 801 ntBASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Col6a6Q8C6K9 Gm26367-201ENSMUST00000104165 132 ntBASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Gm14916-201ENSMUST00000121904 204 ntBASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Gm22536-201ENSMUST00000158171 134 ntBASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Gm38150-201ENSMUST00000192996 452 ntBASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Gm8556-201ENSMUST00000210437 664 ntBASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Gm4759-201ENSMUST00000183414 6622 ntBASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Gm37834-201ENSMUST00000194517 3035 ntBASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Gm22498-201ENSMUST00000104497 86 ntBASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Gm14732-201ENSMUST00000121372 545 ntBASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Gm23743-201ENSMUST00000157389 274 ntBASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Gm23082-201ENSMUST00000157852 133 ntBASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Gm45722-201ENSMUST00000213075 466 ntBASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Gm9700-201ENSMUST00000193786 1617 ntBASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col6a6Q8C6K9 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm14845-201ENSMUST00000121259 306 ntBASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC4.11□□□□□ -1.75
Col6a6Q8C6K9 Gm23638-201ENSMUST00000175073 126 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms