Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm22423-201ENSMUST00000082861 184 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm9496-201ENSMUST00000191295 1601 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 AC115760.1-201ENSMUST00000225160 1327 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm14756-201ENSMUST00000116395 240 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm11438-201ENSMUST00000121582 189 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm14362-201ENSMUST00000121679 273 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm15501-202ENSMUST00000140687 625 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm15254-201ENSMUST00000149567 273 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm22236-201ENSMUST00000157093 106 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm6632-201ENSMUST00000168425 954 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm23450-201ENSMUST00000178285 91 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm23945-201ENSMUST00000179609 92 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm5527-201ENSMUST00000179821 642 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm38008-201ENSMUST00000195333 518 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 BC049739-201ENSMUST00000202626 660 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm45196-201ENSMUST00000206751 825 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm4083-201ENSMUST00000207158 451 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm7780-201ENSMUST00000214787 406 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm2446-201ENSMUST00000220144 772 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 AC154642.1-201ENSMUST00000224173 740 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 AC154335.1-201ENSMUST00000224744 395 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 AV026068-231ENSMUST00000225862 482 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 AC163646.1-201ENSMUST00000227704 397 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 AC159979.1-201ENSMUST00000227927 342 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm26056-201ENSMUST00000083043 104 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm17165-201ENSMUST00000096155 493 ntBASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim47Q8C0E3 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 AC124556.1-201ENSMUST00000218256 1319 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Ap5m1-208ENSMUST00000228238 3514 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm44039-201ENSMUST00000204192 2246 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm42507-201ENSMUST00000201187 2555 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm5084-202ENSMUST00000224064 3609 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm13331-201ENSMUST00000117500 448 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm12040-201ENSMUST00000118357 537 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm12442-201ENSMUST00000118372 338 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm14835-201ENSMUST00000119039 315 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm23386-201ENSMUST00000158585 144 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim47Q8C0E3 Gm28492-201ENSMUST00000190899 1019 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms