Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm19201-201ENSMUST00000210127 778 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 Gm18891-201ENSMUST00000216734 1087 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 AC158633.1-201ENSMUST00000219892 649 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 AC140368.1-202ENSMUST00000226131 658 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PrkdcP97313 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PrkdcP97313 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm42717-201ENSMUST00000197309 3463 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm23133-201ENSMUST00000104255 135 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 Gm14282-201ENSMUST00000119484 240 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 Gm29428-201ENSMUST00000190086 409 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 Gm36983-201ENSMUST00000192280 1102 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 Gm43390-201ENSMUST00000196614 421 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
PrkdcP97313 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm5321-201ENSMUST00000072050 447 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PrkdcP97313 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PrkdcP97313 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PrkdcP97313 AC137871.4-201ENSMUST00000226323 3901 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PrkdcP97313 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
PrkdcP97313 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm43437-201ENSMUST00000198535 3955 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 AC116797.2-201ENSMUST00000224763 4221 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PrkdcP97313 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PrkdcP97313 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm26148-201ENSMUST00000157430 68 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PrkdcP97313 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm23300-201ENSMUST00000082712 125 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 Ube2nl-201ENSMUST00000085228 456 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PrkdcP97313 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PrkdcP97313 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
PrkdcP97313 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PrkdcP97313 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PrkdcP97313 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PrkdcP97313 Gm14539-201ENSMUST00000117527 174 ntBASIC3.1□□□□□ -1.91
PrkdcP97313 Gm14473-201ENSMUST00000122269 557 ntBASIC3.1□□□□□ -1.91
PrkdcP97313 Gm9616-201ENSMUST00000221154 781 ntBASIC3.1□□□□□ -1.91
PrkdcP97313 Gm17137-201ENSMUST00000164106 4371 ntBASIC3.1□□□□□ -1.91
PrkdcP97313 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PrkdcP97313 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PrkdcP97313 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PrkdcP97313 Gm37747-201ENSMUST00000193717 4003 ntBASIC3.1□□□□□ -1.91
PrkdcP97313 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PrkdcP97313 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PrkdcP97313 AC139754.2-201ENSMUST00000218037 1455 ntBASIC3.1□□□□□ -1.91
PrkdcP97313 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
PrkdcP97313 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PrkdcP97313 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PrkdcP97313 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
PrkdcP97313 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC3.1□□□□□ -1.91
PrkdcP97313 Gm13081-201ENSMUST00000121527 5599 ntBASIC3.1□□□□□ -1.91
PrkdcP97313 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC3.1□□□□□ -1.91
PrkdcP97313 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.1□□□□□ -1.91
PrkdcP97313 Gm12893-201ENSMUST00000121732 275 ntBASIC3.1□□□□□ -1.91
PrkdcP97313 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.1□□□□□ -1.91
PrkdcP97313 Gm7443-201ENSMUST00000206355 378 ntBASIC3.1□□□□□ -1.91
PrkdcP97313 Gm8745-201ENSMUST00000207846 782 ntBASIC3.1□□□□□ -1.91
PrkdcP97313 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PrkdcP97313 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PrkdcP97313 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PrkdcP97313 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
PrkdcP97313 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.1□□□□□ -1.91
PrkdcP97313 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC3.1□□□□□ -1.91
PrkdcP97313 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PrkdcP97313 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC3.1□□□□□ -1.91
PrkdcP97313 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms