Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NcanP55066 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.29□□□□□ -1.56
NcanP55066 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NcanP55066 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NcanP55066 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NcanP55066 AC154462.1-201ENSMUST00000228897 2260 ntBASIC5.28□□□□□ -1.56
NcanP55066 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NcanP55066 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
NcanP55066 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NcanP55066 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NcanP55066 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NcanP55066 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.28□□□□□ -1.56
NcanP55066 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NcanP55066 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NcanP55066 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
NcanP55066 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
NcanP55066 Gm43715-201ENSMUST00000196307 2715 ntBASIC5.28□□□□□ -1.56
NcanP55066 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
NcanP55066 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NcanP55066 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NcanP55066 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NcanP55066 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NcanP55066 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NcanP55066 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NcanP55066 Gm12458-201ENSMUST00000119387 495 ntBASIC5.28□□□□□ -1.56
NcanP55066 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.28□□□□□ -1.56
NcanP55066 Gm12332-201ENSMUST00000121397 922 ntBASIC5.28□□□□□ -1.56
NcanP55066 Llph-ps2-201ENSMUST00000122000 393 ntBASIC5.28□□□□□ -1.56
NcanP55066 Gm25332-201ENSMUST00000158038 105 ntBASIC5.28□□□□□ -1.56
NcanP55066 Gm3091-201ENSMUST00000163408 484 ntBASIC5.28□□□□□ -1.56
NcanP55066 Gm11394-201ENSMUST00000181421 517 ntBASIC5.28□□□□□ -1.56
NcanP55066 Mir6408-201ENSMUST00000183643 91 ntBASIC5.28□□□□□ -1.56
NcanP55066 Mir6993-201ENSMUST00000184912 65 ntBASIC5.28□□□□□ -1.56
NcanP55066 Gm7634-201ENSMUST00000185778 553 ntBASIC5.28□□□□□ -1.56
NcanP55066 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.28□□□□□ -1.56
NcanP55066 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NcanP55066 Gm37104-201ENSMUST00000193278 196 ntBASIC5.28□□□□□ -1.56
NcanP55066 Gm37629-201ENSMUST00000193635 1050 ntBASIC5.28□□□□□ -1.56
NcanP55066 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.28□□□□□ -1.56
NcanP55066 Gm45156-201ENSMUST00000207255 439 ntBASIC5.28□□□□□ -1.56
NcanP55066 Gm8745-201ENSMUST00000207846 782 ntBASIC5.28□□□□□ -1.56
NcanP55066 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC5.28□□□□□ -1.56
NcanP55066 Gm6850-201ENSMUST00000210031 530 ntBASIC5.28□□□□□ -1.56
NcanP55066 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NcanP55066 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NcanP55066 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC5.28□□□□□ -1.56
NcanP55066 AC154730.1-201ENSMUST00000227874 816 ntBASIC5.28□□□□□ -1.56
NcanP55066 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NcanP55066 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NcanP55066 Gm22005-201ENSMUST00000082795 141 ntBASIC5.28□□□□□ -1.56
NcanP55066 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NcanP55066 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NcanP55066 Gm44624-201ENSMUST00000208700 2278 ntBASIC5.28□□□□□ -1.56
NcanP55066 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
NcanP55066 Gm43327-201ENSMUST00000199285 4055 ntBASIC5.28□□□□□ -1.56
NcanP55066 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
NcanP55066 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
NcanP55066 Gm42551-201ENSMUST00000197701 1573 ntBASIC5.28□□□□□ -1.56
NcanP55066 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
NcanP55066 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NcanP55066 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.28□□□□□ -1.56
NcanP55066 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NcanP55066 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.28□□□□□ -1.56
NcanP55066 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NcanP55066 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
NcanP55066 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.28□□□□□ -1.56
NcanP55066 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
NcanP55066 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.28□□□□□ -1.56
NcanP55066 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC5.27□□□□□ -1.57
NcanP55066 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.27□□□□□ -1.57
NcanP55066 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NcanP55066 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC5.27□□□□□ -1.57
NcanP55066 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.27□□□□□ -1.57
NcanP55066 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
NcanP55066 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
NcanP55066 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
NcanP55066 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.27□□□□□ -1.57
NcanP55066 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NcanP55066 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NcanP55066 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
NcanP55066 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NcanP55066 Gm22590-201ENSMUST00000104247 128 ntBASIC5.27□□□□□ -1.57
NcanP55066 Gm22497-201ENSMUST00000104499 131 ntBASIC5.27□□□□□ -1.57
NcanP55066 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
NcanP55066 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
NcanP55066 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.27□□□□□ -1.57
NcanP55066 Gm14067-201ENSMUST00000119340 314 ntBASIC5.27□□□□□ -1.57
NcanP55066 Gm13593-201ENSMUST00000121329 692 ntBASIC5.27□□□□□ -1.57
NcanP55066 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NcanP55066 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC5.27□□□□□ -1.57
NcanP55066 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
NcanP55066 Gm23229-201ENSMUST00000157297 105 ntBASIC5.27□□□□□ -1.57
NcanP55066 Gm22226-201ENSMUST00000157355 109 ntBASIC5.27□□□□□ -1.57
NcanP55066 Gm25923-201ENSMUST00000158312 138 ntBASIC5.27□□□□□ -1.57
NcanP55066 Gm7281-201ENSMUST00000160010 543 ntBASIC5.27□□□□□ -1.57
NcanP55066 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.27□□□□□ -1.57
NcanP55066 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
NcanP55066 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC5.27□□□□□ -1.57
NcanP55066 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NcanP55066 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms