Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sox1P53783 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sox1P53783 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sox1P53783 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Sox1P53783 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox1P53783 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox1P53783 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox1P53783 Snord116l9-201ENSMUST00000101891 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm26504-201ENSMUST00000102033 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Sox1P53783 Gm14793-201ENSMUST00000118739 311 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm15381-201ENSMUST00000121501 1156 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC6.27□□□□□ -1.41
Sox1P53783 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.27□□□□□ -1.41
Sox1P53783 Gm23537-201ENSMUST00000157536 330 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm19932-201ENSMUST00000177033 313 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm22258-201ENSMUST00000177645 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm26502-201ENSMUST00000177732 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Snord116l13-201ENSMUST00000177737 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm25350-201ENSMUST00000177849 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Snord116l15-201ENSMUST00000177940 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm23446-201ENSMUST00000177977 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Snord116l4-201ENSMUST00000177982 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm26201-201ENSMUST00000178047 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm24711-201ENSMUST00000178062 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm24609-201ENSMUST00000178166 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm23265-201ENSMUST00000178321 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm22812-201ENSMUST00000178329 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Snord116l3-201ENSMUST00000178370 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm26246-201ENSMUST00000178388 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm22131-201ENSMUST00000178415 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm25155-201ENSMUST00000178450 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm24760-201ENSMUST00000178530 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm26032-201ENSMUST00000178535 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm22285-201ENSMUST00000178576 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm22776-201ENSMUST00000178634 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm22417-201ENSMUST00000178656 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Snord116l2-201ENSMUST00000178675 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm26270-201ENSMUST00000178690 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Snord116l16-201ENSMUST00000178777 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm25074-201ENSMUST00000178782 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm25210-201ENSMUST00000178813 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm25157-201ENSMUST00000178914 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm23313-201ENSMUST00000178931 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Snord116l17-201ENSMUST00000178936 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm23089-201ENSMUST00000178947 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm22046-201ENSMUST00000179027 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Snord116l10-201ENSMUST00000179053 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm23767-201ENSMUST00000179278 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm24153-201ENSMUST00000179280 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm25597-201ENSMUST00000179388 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Snord116l1-201ENSMUST00000179518 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm22941-201ENSMUST00000179630 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm22631-201ENSMUST00000179656 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm25816-201ENSMUST00000179764 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Snord116l14-201ENSMUST00000179875 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Snord116l8-201ENSMUST00000179889 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Snord116l7-201ENSMUST00000179895 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Snord116l5-201ENSMUST00000179927 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Snord116l6-201ENSMUST00000179955 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm26188-201ENSMUST00000179963 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm25471-201ENSMUST00000180126 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm26433-201ENSMUST00000180227 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Snord116l11-201ENSMUST00000180312 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm23862-201ENSMUST00000180342 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm22128-201ENSMUST00000180346 94 ntBASIC6.27□□□□□ -1.41
Sox1P53783 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sox1P53783 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm27679-201ENSMUST00000184612 84 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm27760-201ENSMUST00000185048 114 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox1P53783 Gm37837-201ENSMUST00000191743 604 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm36935-201ENSMUST00000192526 292 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm31211-201ENSMUST00000199170 253 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm6702-201ENSMUST00000208496 471 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm18587-201ENSMUST00000213736 841 ntBASIC6.27□□□□□ -1.41
Sox1P53783 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.27□□□□□ -1.41
Sox1P53783 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC6.27□□□□□ -1.41
Sox1P53783 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox1P53783 Gm23345-201ENSMUST00000083817 150 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Gm23502-201ENSMUST00000083902 145 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Sox1P53783 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox1P53783 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.27□□□□□ -1.41
Sox1P53783 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox1P53783 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox1P53783 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox1P53783 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox1P53783 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Sox1P53783 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Sox1P53783 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Sox1P53783 AC170999.1-201ENSMUST00000226359 1585 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Sox1P53783 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Sox1P53783 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sox1P53783 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sox1P53783 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.26□□□□□ -1.41
Sox1P53783 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
Sox1P53783 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sox1P53783 Gm19335-201ENSMUST00000195836 2069 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms