Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC3.88□□□□□ -1.79
Sdc1P18828 Gm19181-201ENSMUST00000218891 940 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Sdc1P18828 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC3.88□□□□□ -1.79
Sdc1P18828 AC138765.1-201ENSMUST00000228657 385 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Sdc1P18828 n-R5s62-201ENSMUST00000082780 96 ntBASIC3.88□□□□□ -1.79
Sdc1P18828 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
Sdc1P18828 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Sdc1P18828 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Sdc1P18828 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Sdc1P18828 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Sdc1P18828 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Sdc1P18828 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Sdc1P18828 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Sdc1P18828 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
Sdc1P18828 Gm13100-201ENSMUST00000117157 1439 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
Sdc1P18828 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Sdc1P18828 Gm3665-201ENSMUST00000177214 2461 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Sdc1P18828 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Sdc1P18828 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Sdc1P18828 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Sdc1P18828 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Sdc1P18828 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Sdc1P18828 Gm24789-201ENSMUST00000104282 131 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 Gm14786-201ENSMUST00000117127 944 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 Gm9005-201ENSMUST00000119908 607 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 Gm14784-201ENSMUST00000121604 663 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 Gm13669-201ENSMUST00000122366 457 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 Gm24628-201ENSMUST00000122761 289 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC3.87□□□□□ -1.79
Sdc1P18828 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Sdc1P18828 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Sdc1P18828 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC3.87□□□□□ -1.79
Sdc1P18828 Ear-ps9-201ENSMUST00000161963 460 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 n-R5s209-201ENSMUST00000179494 119 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC3.87□□□□□ -1.79
Sdc1P18828 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Sdc1P18828 Gm21742-201ENSMUST00000189352 548 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 Gm42830-201ENSMUST00000196642 313 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 AL645522.1-201ENSMUST00000197692 104 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 Gm8039-201ENSMUST00000204758 712 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Sdc1P18828 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC3.87□□□□□ -1.79
Sdc1P18828 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Sdc1P18828 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC3.87□□□□□ -1.79
Sdc1P18828 AC132260.2-201ENSMUST00000224482 344 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 AC124408.2-201ENSMUST00000228168 645 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 AC165437.1-201ENSMUST00000228640 536 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC3.87□□□□□ -1.79
Sdc1P18828 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Sdc1P18828 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Sdc1P18828 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Sdc1P18828 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Sdc1P18828 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Sdc1P18828 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Sdc1P18828 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Sdc1P18828 Mir143-201ENSMUST00000083511 63 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Sdc1P18828 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Sdc1P18828 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
Sdc1P18828 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Sdc1P18828 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Sdc1P18828 AC156025.1-201ENSMUST00000223597 3551 ntBASIC3.87□□□□□ -1.79
Sdc1P18828 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Sdc1P18828 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Sdc1P18828 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC3.87□□□□□ -1.79
Sdc1P18828 Gm8402-201ENSMUST00000118183 1770 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Gm8383-201ENSMUST00000121179 1770 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Sdc1P18828 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Sdc1P18828 Gm45804-201ENSMUST00000212137 3435 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Sdc1P18828 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Sdc1P18828 Gm25422-201ENSMUST00000104219 129 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Gm24608-201ENSMUST00000104381 136 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Sdc1P18828 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Sdc1P18828 Gm7834-201ENSMUST00000117560 437 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Gm13681-201ENSMUST00000117925 210 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Gm12423-201ENSMUST00000118334 135 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Gm12465-201ENSMUST00000118591 300 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Gm15785-201ENSMUST00000119145 694 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Gm15781-201ENSMUST00000120216 323 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Gm15390-201ENSMUST00000120323 738 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Gm15300-201ENSMUST00000122324 279 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.86□□□□□ -1.79
Sdc1P18828 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Sdc1P18828 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Sdc1P18828 Gm26346-201ENSMUST00000157525 329 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Gm22428-201ENSMUST00000158554 132 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC3.86□□□□□ -1.79
Sdc1P18828 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms