Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm44286-201ENSMUST00000204098 1487 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm22194-201ENSMUST00000116869 95 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Defa-ps14-201ENSMUST00000121373 418 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm25383-201ENSMUST00000157810 144 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm23318-201ENSMUST00000158000 108 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm22529-201ENSMUST00000158817 123 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm23700-201ENSMUST00000158842 102 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm28094-201ENSMUST00000185262 390 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm2147-201ENSMUST00000193588 639 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm42720-201ENSMUST00000196813 300 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm43276-201ENSMUST00000199712 364 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm3148-201ENSMUST00000203594 612 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm45731-201ENSMUST00000211988 1203 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm19936-201ENSMUST00000216414 838 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm3213-201ENSMUST00000219296 441 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 AC152169.2-201ENSMUST00000224558 613 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Nsa2-203ENSMUST00000225410 974 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 AC133517.2-201ENSMUST00000226820 690 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Mir879-201ENSMUST00000104703 76 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Gm16149-201ENSMUST00000117631 309 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Gm14788-201ENSMUST00000119457 375 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Gm15166-201ENSMUST00000120790 385 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Gm13007-201ENSMUST00000121866 365 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Gm16345-201ENSMUST00000146065 158 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Gm28468-201ENSMUST00000188536 615 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Gm28803-201ENSMUST00000190385 764 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Gm36638-201ENSMUST00000193295 400 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Gm2053-201ENSMUST00000195671 631 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Gm18850-201ENSMUST00000211578 388 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Gm7117-201ENSMUST00000071515 387 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Olfr654-201ENSMUST00000098173 1155 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Gm37789-201ENSMUST00000192862 2889 ntBASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trim3Q9R1R2 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms