Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm23593-201ENSMUST00000104309 120 ntBASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Gm12820-201ENSMUST00000119233 342 ntBASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Gm14125-202ENSMUST00000120921 756 ntBASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Gm5699-201ENSMUST00000152491 723 ntBASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Gm26153-201ENSMUST00000157433 127 ntBASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Gm9320-201ENSMUST00000184151 473 ntBASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Gm29475-201ENSMUST00000190767 312 ntBASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Gm44845-201ENSMUST00000208773 335 ntBASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Gm29785-201ENSMUST00000217033 383 ntBASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC5.51□□□□□ -1.53
Smc1aQ9CU62 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.51□□□□□ -1.53
Smc1aQ9CU62 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Gm12717-201ENSMUST00000118427 983 ntBASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Gm22958-201ENSMUST00000122512 184 ntBASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Gm23958-201ENSMUST00000157207 105 ntBASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Gm26355-201ENSMUST00000158220 105 ntBASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Gm9687-201ENSMUST00000189312 602 ntBASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Gm28769-201ENSMUST00000190176 615 ntBASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Gm37710-201ENSMUST00000193501 1274 ntBASIC5.5□□□□□ -1.53
Smc1aQ9CU62 AC174780.1-201ENSMUST00000199415 1107 ntBASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Gm42643-201ENSMUST00000200504 279 ntBASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 AC154562.1-201ENSMUST00000226140 966 ntBASIC5.5□□□□□ -1.53
Smc1aQ9CU62 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Gm22155-201ENSMUST00000083836 162 ntBASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Smc1aQ9CU62 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Gm37569-201ENSMUST00000192111 1722 ntBASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Gm14560-201ENSMUST00000118672 375 ntBASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Gm12704-201ENSMUST00000119789 464 ntBASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Gm5383-201ENSMUST00000121177 617 ntBASIC5.49□□□□□ -1.53
Smc1aQ9CU62 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.49□□□□□ -1.53
Smc1aQ9CU62 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Gm22084-201ENSMUST00000157585 105 ntBASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Gm3531-201ENSMUST00000162698 489 ntBASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Mir6926-201ENSMUST00000184562 68 ntBASIC5.49□□□□□ -1.53
Smc1aQ9CU62 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Gm37682-201ENSMUST00000191776 522 ntBASIC5.49□□□□□ -1.53
Smc1aQ9CU62 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Gm45032-201ENSMUST00000205375 520 ntBASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Gm20586-201ENSMUST00000210122 547 ntBASIC5.49□□□□□ -1.53
Smc1aQ9CU62 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Gm3086-202ENSMUST00000221248 310 ntBASIC5.49□□□□□ -1.53
Smc1aQ9CU62 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.49□□□□□ -1.53
Smc1aQ9CU62 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms