Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 AC120153.1-201ENSMUST00000226502 1311 ntBASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Gm11409-201ENSMUST00000118621 403 ntBASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Gm11761-201ENSMUST00000121392 445 ntBASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Gm16259-201ENSMUST00000145241 553 ntBASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Gm23115-201ENSMUST00000158480 108 ntBASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Gm43524-201ENSMUST00000197278 298 ntBASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 AC154184.2-201ENSMUST00000225335 349 ntBASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Mir27a-201ENSMUST00000083510 87 ntBASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rpp40Q8R1F9 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Mir292-201ENSMUST00000104847 82 ntBASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Gm15297-201ENSMUST00000117795 290 ntBASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Gm11483-201ENSMUST00000119839 247 ntBASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Gm12734-201ENSMUST00000120228 948 ntBASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Gm25103-201ENSMUST00000122671 318 ntBASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Gm23318-201ENSMUST00000158000 108 ntBASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Gm24217-201ENSMUST00000158260 133 ntBASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Gm28094-201ENSMUST00000185262 390 ntBASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Gm36986-201ENSMUST00000195320 353 ntBASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Gm6590-201ENSMUST00000203343 687 ntBASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Gm8703-201ENSMUST00000203793 730 ntBASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Gm3912-203ENSMUST00000211024 367 ntBASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Gm42479-201ENSMUST00000198654 1356 ntBASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.27□□□□□ -1.57
Rpp40Q8R1F9 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.26□□□□□ -1.57
Rpp40Q8R1F9 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Rpp40Q8R1F9 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Rpp40Q8R1F9 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.26□□□□□ -1.57
Rpp40Q8R1F9 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Rpp40Q8R1F9 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Rpp40Q8R1F9 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Rpp40Q8R1F9 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Rpp40Q8R1F9 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Rpp40Q8R1F9 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.26□□□□□ -1.57
Rpp40Q8R1F9 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.26□□□□□ -1.57
Rpp40Q8R1F9 Gm11781-201ENSMUST00000118328 472 ntBASIC5.26□□□□□ -1.57
Rpp40Q8R1F9 Gm12287-201ENSMUST00000119770 707 ntBASIC5.26□□□□□ -1.57
Rpp40Q8R1F9 Gm13484-201ENSMUST00000120738 412 ntBASIC5.26□□□□□ -1.57
Rpp40Q8R1F9 Gm13867-201ENSMUST00000120844 395 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 151.5 ms