Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim9Q8C7M3 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm24789-201ENSMUST00000104282 131 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm14610-201ENSMUST00000118358 966 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm13359-201ENSMUST00000119000 695 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm12313-201ENSMUST00000121347 421 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm24840-201ENSMUST00000122603 147 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm11507-201ENSMUST00000156462 412 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm2617-201ENSMUST00000185690 1066 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm29525-201ENSMUST00000189844 699 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm29523-201ENSMUST00000191415 699 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm29813-201ENSMUST00000195856 447 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm42459-201ENSMUST00000199679 742 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 AC124542.1-201ENSMUST00000205588 908 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm7119-201ENSMUST00000221345 695 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm18026-201ENSMUST00000222789 727 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 AC154738.2-201ENSMUST00000227403 1110 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm37703-201ENSMUST00000192292 1784 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim9Q8C7M3 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Trim9Q8C7M3 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Mir711-201ENSMUST00000102188 82 ntBASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Gm15159-201ENSMUST00000117062 764 ntBASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Gm15185-201ENSMUST00000117397 746 ntBASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Gm12392-201ENSMUST00000118014 938 ntBASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Gm12985-201ENSMUST00000118376 183 ntBASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Gm13121-201ENSMUST00000120637 632 ntBASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Gm17377-201ENSMUST00000165184 207 ntBASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Mir7687-201ENSMUST00000184722 59 ntBASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Mir6400-201ENSMUST00000184870 92 ntBASIC5.66□□□□□ -1.5
Trim9Q8C7M3 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Gm37966-201ENSMUST00000193122 326 ntBASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Gm20770-201ENSMUST00000193474 694 ntBASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC5.66□□□□□ -1.5
Trim9Q8C7M3 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms