Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm7754-201ENSMUST00000223075 2064 ntBASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Ubfd1Q78JW9 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm42701-201ENSMUST00000196117 1657 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm24429-201ENSMUST00000104076 132 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Lipe-203ENSMUST00000105177 1251 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm12287-201ENSMUST00000119770 707 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm15193-201ENSMUST00000120224 865 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm1866-201ENSMUST00000120701 477 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm6673-201ENSMUST00000166114 700 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm18358-201ENSMUST00000173179 1277 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm20545-201ENSMUST00000174739 210 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm26318-201ENSMUST00000176507 96 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm27025-201ENSMUST00000182392 942 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm27942-201ENSMUST00000184669 101 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm21654-201ENSMUST00000188086 691 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm37581-201ENSMUST00000192371 988 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm37421-201ENSMUST00000193088 132 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm38185-201ENSMUST00000193195 694 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm37445-201ENSMUST00000195318 242 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm44688-201ENSMUST00000209083 537 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 AC159297.2-201ENSMUST00000219567 1075 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 AC118230.1-201ENSMUST00000220196 656 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 AC151730.2-201ENSMUST00000224027 475 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm25139-201ENSMUST00000083247 210 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm9386-201ENSMUST00000095195 381 ntBASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ubfd1Q78JW9 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 Gm22266-201ENSMUST00000104011 138 ntBASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 Gm22019-201ENSMUST00000104359 96 ntBASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 Gm2348-201ENSMUST00000108782 300 ntBASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 Gm11781-201ENSMUST00000118328 472 ntBASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 Gm6884-201ENSMUST00000119318 615 ntBASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 Gm14563-201ENSMUST00000120571 354 ntBASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 Gm11389-201ENSMUST00000121407 430 ntBASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 Gm15057-201ENSMUST00000121516 534 ntBASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 Gm11344-201ENSMUST00000122011 335 ntBASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ubfd1Q78JW9 Gm13194-201ENSMUST00000142299 311 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 106.3 ms