Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trim41Q5NCC3 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC11.09□□□□□ -0.63
Trim41Q5NCC3 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC11.08□□□□□ -0.63
Trim41Q5NCC3 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Gm15801-201ENSMUST00000120920 522 ntBASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Gm15096-201ENSMUST00000121918 878 ntBASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Gm12095-201ENSMUST00000121962 816 ntBASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Gm22596-201ENSMUST00000157601 316 ntBASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Gm23579-201ENSMUST00000158528 103 ntBASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Gm8783-201ENSMUST00000159764 522 ntBASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Gm26950-201ENSMUST00000182734 498 ntBASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Gm37492-201ENSMUST00000191948 376 ntBASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Gm8860-201ENSMUST00000193160 445 ntBASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC11.08□□□□□ -0.64
Trim41Q5NCC3 AC122393.2-201ENSMUST00000226404 1093 ntBASIC11.08□□□□□ -0.64
Trim41Q5NCC3 AC122459.2-201ENSMUST00000227099 638 ntBASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Gm25682-201ENSMUST00000083942 164 ntBASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Gm45061-201ENSMUST00000204395 2095 ntBASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Gm7048-201ENSMUST00000199395 1891 ntBASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trim41Q5NCC3 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Gm20768-201ENSMUST00000199527 2338 ntBASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Gm15950-201ENSMUST00000162902 1973 ntBASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Gm8692-201ENSMUST00000118102 438 ntBASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Gm16423-201ENSMUST00000120078 947 ntBASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Gm26349-201ENSMUST00000157530 130 ntBASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Gm27699-201ENSMUST00000183553 180 ntBASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Gm28976-201ENSMUST00000188070 144 ntBASIC11.07□□□□□ -0.64
Trim41Q5NCC3 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Gm28408-201ENSMUST00000191557 463 ntBASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Gm44655-201ENSMUST00000207768 423 ntBASIC11.07□□□□□ -0.64
Trim41Q5NCC3 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC11.07□□□□□ -0.64
Trim41Q5NCC3 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trim41Q5NCC3 AC122251.2-201ENSMUST00000227341 603 ntBASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim41Q5NCC3 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Gm15101-201ENSMUST00000178818 1502 ntBASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Gm44417-201ENSMUST00000203298 3359 ntBASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Gm42630-201ENSMUST00000195908 3448 ntBASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Gm42885-201ENSMUST00000200763 4214 ntBASIC11.07□□□□□ -0.64
Trim41Q5NCC3 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim41Q5NCC3 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 AC098728.1-202ENSMUST00000226656 2198 ntBASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Gm13604-201ENSMUST00000119332 482 ntBASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Gm13788-201ENSMUST00000120767 601 ntBASIC11.06□□□□□ -0.64
Trim41Q5NCC3 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Gm5924-201ENSMUST00000132554 871 ntBASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Gm23473-201ENSMUST00000158883 116 ntBASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Gm27190-201ENSMUST00000184890 542 ntBASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Gm44923-201ENSMUST00000206673 85 ntBASIC11.06□□□□□ -0.64
Trim41Q5NCC3 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Gm17915-201ENSMUST00000222077 548 ntBASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Gm19154-201ENSMUST00000223330 940 ntBASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Gm23679-201ENSMUST00000083161 119 ntBASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Mir129-2-201ENSMUST00000083577 90 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms