Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Col17a1Q07563 AC154481.2-201ENSMUST00000222526 3175 ntBASIC7.74□□□□□ -1.17
Col17a1Q07563 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col17a1Q07563 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Col17a1Q07563 Gm15385-201ENSMUST00000118725 667 ntBASIC7.74□□□□□ -1.17
Col17a1Q07563 Gm28064-201ENSMUST00000185639 858 ntBASIC7.74□□□□□ -1.17
Col17a1Q07563 Gm4045-201ENSMUST00000204076 310 ntBASIC7.74□□□□□ -1.17
Col17a1Q07563 Gm45156-201ENSMUST00000207255 439 ntBASIC7.74□□□□□ -1.17
Col17a1Q07563 Gm19885-201ENSMUST00000212853 343 ntBASIC7.74□□□□□ -1.17
Col17a1Q07563 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC7.74□□□□□ -1.17
Col17a1Q07563 Gm8911-201ENSMUST00000213986 652 ntBASIC7.74□□□□□ -1.17
Col17a1Q07563 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC7.74□□□□□ -1.17
Col17a1Q07563 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC7.74□□□□□ -1.17
Col17a1Q07563 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Col17a1Q07563 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col17a1Q07563 Mir26a-2-201ENSMUST00000083496 84 ntBASIC7.74□□□□□ -1.17
Col17a1Q07563 Gm22154-201ENSMUST00000083844 131 ntBASIC7.74□□□□□ -1.17
Col17a1Q07563 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col17a1Q07563 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Col17a1Q07563 Gm37541-201ENSMUST00000192464 2315 ntBASIC7.74□□□□□ -1.17
Col17a1Q07563 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col17a1Q07563 AC102431.1-201ENSMUST00000223773 1449 ntBASIC7.73□□□□□ -1.17
Col17a1Q07563 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Col17a1Q07563 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col17a1Q07563 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col17a1Q07563 Gm43312-201ENSMUST00000201655 2466 ntBASIC7.73□□□□□ -1.17
Col17a1Q07563 Gm45093-201ENSMUST00000206859 2463 ntBASIC7.73□□□□□ -1.17
Col17a1Q07563 Gm37531-201ENSMUST00000191628 5415 ntBASIC7.73□□□□□ -1.17
Col17a1Q07563 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Col17a1Q07563 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Col17a1Q07563 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC7.73□□□□□ -1.17
Col17a1Q07563 Gm15279-201ENSMUST00000155593 288 ntBASIC7.73□□□□□ -1.17
Col17a1Q07563 Gm22536-201ENSMUST00000158171 134 ntBASIC7.73□□□□□ -1.17
Col17a1Q07563 Gm24939-201ENSMUST00000158325 137 ntBASIC7.73□□□□□ -1.17
Col17a1Q07563 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC7.73□□□□□ -1.17
Col17a1Q07563 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC7.73□□□□□ -1.17
Col17a1Q07563 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC7.73□□□□□ -1.17
Col17a1Q07563 Gm19774-201ENSMUST00000190667 114 ntBASIC7.73□□□□□ -1.17
Col17a1Q07563 Gm18183-201ENSMUST00000191024 615 ntBASIC7.73□□□□□ -1.17
Col17a1Q07563 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC7.73□□□□□ -1.17
Col17a1Q07563 Gm37104-201ENSMUST00000193278 196 ntBASIC7.73□□□□□ -1.17
Col17a1Q07563 Gm42776-201ENSMUST00000198031 406 ntBASIC7.73□□□□□ -1.17
Col17a1Q07563 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC7.73□□□□□ -1.17
Col17a1Q07563 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Col17a1Q07563 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col17a1Q07563 Gm37077-201ENSMUST00000195723 3691 ntBASIC7.73□□□□□ -1.17
Col17a1Q07563 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col17a1Q07563 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Col17a1Q07563 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC7.72□□□□□ -1.17
Col17a1Q07563 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col17a1Q07563 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col17a1Q07563 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Col17a1Q07563 Gm12340-201ENSMUST00000121617 462 ntBASIC7.72□□□□□ -1.17
Col17a1Q07563 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Col17a1Q07563 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC7.72□□□□□ -1.17
Col17a1Q07563 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col17a1Q07563 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col17a1Q07563 Gm27037-201ENSMUST00000182270 960 ntBASIC7.72□□□□□ -1.17
Col17a1Q07563 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC7.72□□□□□ -1.17
Col17a1Q07563 Gm18802-201ENSMUST00000186270 888 ntBASIC7.72□□□□□ -1.17
Col17a1Q07563 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col17a1Q07563 Gm37934-201ENSMUST00000192902 402 ntBASIC7.72□□□□□ -1.17
Col17a1Q07563 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC7.72□□□□□ -1.17
Col17a1Q07563 Gm44354-201ENSMUST00000196017 143 ntBASIC7.72□□□□□ -1.17
Col17a1Q07563 Gm43232-201ENSMUST00000201346 364 ntBASIC7.72□□□□□ -1.17
Col17a1Q07563 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC7.72□□□□□ -1.17
Col17a1Q07563 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC7.72□□□□□ -1.17
Col17a1Q07563 AC124732.4-201ENSMUST00000220930 1274 ntBASIC7.72□□□□□ -1.17
Col17a1Q07563 AC134335.1-201ENSMUST00000227626 329 ntBASIC7.72□□□□□ -1.17
Col17a1Q07563 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Col17a1Q07563 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col17a1Q07563 Snora7a-201ENSMUST00000082629 140 ntBASIC7.72□□□□□ -1.17
Col17a1Q07563 Mir383-201ENSMUST00000083523 70 ntBASIC7.72□□□□□ -1.17
Col17a1Q07563 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col17a1Q07563 Gm43121-201ENSMUST00000199065 1305 ntBASIC7.72□□□□□ -1.17
Col17a1Q07563 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col17a1Q07563 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Col17a1Q07563 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Col17a1Q07563 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Col17a1Q07563 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col17a1Q07563 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col17a1Q07563 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Col17a1Q07563 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Col17a1Q07563 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Col17a1Q07563 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Col17a1Q07563 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
Col17a1Q07563 Gm43990-201ENSMUST00000203790 1691 ntBASIC7.71□□□□□ -1.17
Col17a1Q07563 AC131068.3-201ENSMUST00000228438 1456 ntBASIC7.71□□□□□ -1.18
Col17a1Q07563 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Col17a1Q07563 Gm12383-201ENSMUST00000120628 760 ntBASIC7.71□□□□□ -1.18
Col17a1Q07563 Gm15014-201ENSMUST00000120742 258 ntBASIC7.71□□□□□ -1.18
Col17a1Q07563 Gm25923-201ENSMUST00000158312 138 ntBASIC7.71□□□□□ -1.18
Col17a1Q07563 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Col17a1Q07563 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC7.71□□□□□ -1.18
Col17a1Q07563 Gm8151-201ENSMUST00000184817 871 ntBASIC7.71□□□□□ -1.18
Col17a1Q07563 Gm29592-201ENSMUST00000189434 370 ntBASIC7.71□□□□□ -1.18
Col17a1Q07563 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC7.71□□□□□ -1.18
Col17a1Q07563 Gm17780-201ENSMUST00000207142 612 ntBASIC7.71□□□□□ -1.18
Col17a1Q07563 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Col17a1Q07563 AC154640.4-201ENSMUST00000226647 4640 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms