Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC5.31□□□□□ -1.56
NcanP55066 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.31□□□□□ -1.56
NcanP55066 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NcanP55066 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NcanP55066 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
NcanP55066 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
NcanP55066 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
NcanP55066 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NcanP55066 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.3□□□□□ -1.56
NcanP55066 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
NcanP55066 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NcanP55066 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NcanP55066 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.3□□□□□ -1.56
NcanP55066 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NcanP55066 AC163296.2-201ENSMUST00000220177 1315 ntBASIC5.3□□□□□ -1.56
NcanP55066 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NcanP55066 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NcanP55066 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NcanP55066 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NcanP55066 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NcanP55066 Gm22269-201ENSMUST00000104002 130 ntBASIC5.3□□□□□ -1.56
NcanP55066 Gm23594-201ENSMUST00000104307 134 ntBASIC5.3□□□□□ -1.56
NcanP55066 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
NcanP55066 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.3□□□□□ -1.56
NcanP55066 Gm14909-201ENSMUST00000117853 351 ntBASIC5.3□□□□□ -1.56
NcanP55066 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.3□□□□□ -1.56
NcanP55066 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC5.3□□□□□ -1.56
NcanP55066 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NcanP55066 Mir7022-201ENSMUST00000183749 61 ntBASIC5.3□□□□□ -1.56
NcanP55066 Gm4526-201ENSMUST00000186039 920 ntBASIC5.3□□□□□ -1.56
NcanP55066 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.3□□□□□ -1.56
NcanP55066 Gm20561-201ENSMUST00000188131 292 ntBASIC5.3□□□□□ -1.56
NcanP55066 Gm19596-201ENSMUST00000203685 739 ntBASIC5.3□□□□□ -1.56
NcanP55066 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC5.3□□□□□ -1.56
NcanP55066 Gm44582-201ENSMUST00000209125 445 ntBASIC5.3□□□□□ -1.56
NcanP55066 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NcanP55066 Gm18487-201ENSMUST00000215826 878 ntBASIC5.3□□□□□ -1.56
NcanP55066 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NcanP55066 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.3□□□□□ -1.56
NcanP55066 AC158142.1-201ENSMUST00000226721 416 ntBASIC5.3□□□□□ -1.56
NcanP55066 Gm5185-201ENSMUST00000080271 619 ntBASIC5.3□□□□□ -1.56
NcanP55066 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.3□□□□□ -1.56
NcanP55066 Gm23099-201ENSMUST00000083454 139 ntBASIC5.3□□□□□ -1.56
NcanP55066 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NcanP55066 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NcanP55066 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NcanP55066 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
NcanP55066 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.3□□□□□ -1.56
NcanP55066 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NcanP55066 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NcanP55066 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NcanP55066 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.29□□□□□ -1.56
NcanP55066 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
NcanP55066 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NcanP55066 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.29□□□□□ -1.56
NcanP55066 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NcanP55066 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NcanP55066 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NcanP55066 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NcanP55066 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NcanP55066 AC159188.2-201ENSMUST00000224103 1301 ntBASIC5.29□□□□□ -1.56
NcanP55066 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.29□□□□□ -1.56
NcanP55066 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NcanP55066 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NcanP55066 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NcanP55066 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NcanP55066 Gm15014-201ENSMUST00000120742 258 ntBASIC5.29□□□□□ -1.56
NcanP55066 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC5.29□□□□□ -1.56
NcanP55066 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC5.29□□□□□ -1.56
NcanP55066 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC5.29□□□□□ -1.56
NcanP55066 Gm22764-201ENSMUST00000158370 92 ntBASIC5.29□□□□□ -1.56
NcanP55066 Gm22326-201ENSMUST00000158897 351 ntBASIC5.29□□□□□ -1.56
NcanP55066 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NcanP55066 Gm25817-201ENSMUST00000177758 121 ntBASIC5.29□□□□□ -1.56
NcanP55066 Gm24766-201ENSMUST00000179182 121 ntBASIC5.29□□□□□ -1.56
NcanP55066 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NcanP55066 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NcanP55066 Gm29452-201ENSMUST00000187996 313 ntBASIC5.29□□□□□ -1.56
NcanP55066 Gm28860-201ENSMUST00000188103 313 ntBASIC5.29□□□□□ -1.56
NcanP55066 Gm8939-201ENSMUST00000192577 964 ntBASIC5.29□□□□□ -1.56
NcanP55066 Gm18529-201ENSMUST00000193025 1257 ntBASIC5.29□□□□□ -1.56
NcanP55066 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC5.29□□□□□ -1.56
NcanP55066 Trbv11-201ENSMUST00000194354 260 ntBASIC5.29□□□□□ -1.56
NcanP55066 Gm38221-201ENSMUST00000195146 365 ntBASIC5.29□□□□□ -1.56
NcanP55066 Igkv11-118-201ENSMUST00000199448 346 ntBASIC5.29□□□□□ -1.56
NcanP55066 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.29□□□□□ -1.56
NcanP55066 Gm45081-201ENSMUST00000206281 572 ntBASIC5.29□□□□□ -1.56
NcanP55066 AC147615.1-201ENSMUST00000218914 441 ntBASIC5.29□□□□□ -1.56
NcanP55066 Gm9309-201ENSMUST00000223537 546 ntBASIC5.29□□□□□ -1.56
NcanP55066 AC158388.1-201ENSMUST00000225441 256 ntBASIC5.29□□□□□ -1.56
NcanP55066 Desi2-202ENSMUST00000069568 1193 ntBASIC5.29□□□□□ -1.56
NcanP55066 Mir132-201ENSMUST00000083603 66 ntBASIC5.29□□□□□ -1.56
NcanP55066 Gm22154-201ENSMUST00000083844 131 ntBASIC5.29□□□□□ -1.56
NcanP55066 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NcanP55066 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
NcanP55066 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NcanP55066 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NcanP55066 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NcanP55066 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.29□□□□□ -1.56
NcanP55066 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms