Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Trbv10-201ENSMUST00000168322 289 ntBASIC6.29□□□□□ -1.4
Sox1P53783 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox1P53783 Gm18343-201ENSMUST00000172802 604 ntBASIC6.29□□□□□ -1.4
Sox1P53783 Gm26381-201ENSMUST00000174895 92 ntBASIC6.29□□□□□ -1.4
Sox1P53783 Gm44370-201ENSMUST00000175436 112 ntBASIC6.29□□□□□ -1.4
Sox1P53783 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sox1P53783 Gm26335-201ENSMUST00000178449 107 ntBASIC6.29□□□□□ -1.4
Sox1P53783 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sox1P53783 Gm9457-201ENSMUST00000180176 372 ntBASIC6.29□□□□□ -1.4
Sox1P53783 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sox1P53783 Mir496b-201ENSMUST00000184935 113 ntBASIC6.29□□□□□ -1.4
Sox1P53783 Gm19206-201ENSMUST00000186401 827 ntBASIC6.29□□□□□ -1.4
Sox1P53783 Gm28116-201ENSMUST00000189064 387 ntBASIC6.29□□□□□ -1.4
Sox1P53783 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sox1P53783 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.29□□□□□ -1.4
Sox1P53783 Gm43467-201ENSMUST00000197441 437 ntBASIC6.29□□□□□ -1.4
Sox1P53783 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC6.29□□□□□ -1.4
Sox1P53783 Gm44833-201ENSMUST00000208368 331 ntBASIC6.29□□□□□ -1.4
Sox1P53783 AC174776.1-201ENSMUST00000221509 405 ntBASIC6.29□□□□□ -1.4
Sox1P53783 AC174776.2-201ENSMUST00000222561 405 ntBASIC6.29□□□□□ -1.4
Sox1P53783 AC192333.2-201ENSMUST00000224771 196 ntBASIC6.29□□□□□ -1.4
Sox1P53783 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox1P53783 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.29□□□□□ -1.4
Sox1P53783 Gm22364-201ENSMUST00000083097 98 ntBASIC6.29□□□□□ -1.4
Sox1P53783 Gm24522-201ENSMUST00000083964 108 ntBASIC6.29□□□□□ -1.4
Sox1P53783 Gm7731-201ENSMUST00000091759 470 ntBASIC6.29□□□□□ -1.4
Sox1P53783 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sox1P53783 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.29□□□□□ -1.4
Sox1P53783 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox1P53783 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sox1P53783 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox1P53783 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC6.29□□□□□ -1.4
Sox1P53783 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sox1P53783 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sox1P53783 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.29□□□□□ -1.4
Sox1P53783 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sox1P53783 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.29□□□□□ -1.4
Sox1P53783 AC139754.3-201ENSMUST00000220444 1627 ntBASIC6.28□□□□□ -1.4
Sox1P53783 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox1P53783 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox1P53783 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sox1P53783 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.28□□□□□ -1.4
Sox1P53783 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sox1P53783 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Sox1P53783 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox1P53783 Gm43490-201ENSMUST00000197593 2652 ntBASIC6.28□□□□□ -1.4
Sox1P53783 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox1P53783 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sox1P53783 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Sox1P53783 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sox1P53783 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.28□□□□□ -1.4
Sox1P53783 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.28□□□□□ -1.4
Sox1P53783 Gm15113-201ENSMUST00000119280 836 ntBASIC6.28□□□□□ -1.4
Sox1P53783 Gm15899-201ENSMUST00000128586 238 ntBASIC6.28□□□□□ -1.4
Sox1P53783 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC6.28□□□□□ -1.4
Sox1P53783 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sox1P53783 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Sox1P53783 Gm23568-201ENSMUST00000177960 92 ntBASIC6.28□□□□□ -1.4
Sox1P53783 Gm24829-201ENSMUST00000179245 92 ntBASIC6.28□□□□□ -1.4
Sox1P53783 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sox1P53783 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.28□□□□□ -1.4
Sox1P53783 Gm5372-201ENSMUST00000187540 409 ntBASIC6.28□□□□□ -1.4
Sox1P53783 Gm17777-201ENSMUST00000189740 1276 ntBASIC6.28□□□□□ -1.4
Sox1P53783 Gm29490-201ENSMUST00000190923 342 ntBASIC6.28□□□□□ -1.4
Sox1P53783 Gm42896-201ENSMUST00000201249 1113 ntBASIC6.28□□□□□ -1.4
Sox1P53783 Gm18644-201ENSMUST00000211458 815 ntBASIC6.28□□□□□ -1.4
Sox1P53783 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC6.28□□□□□ -1.4
Sox1P53783 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC6.28□□□□□ -1.4
Sox1P53783 Gm46234-201ENSMUST00000218702 259 ntBASIC6.28□□□□□ -1.4
Sox1P53783 AC170086.1-201ENSMUST00000225190 497 ntBASIC6.28□□□□□ -1.4
Sox1P53783 AC154436.2-201ENSMUST00000227408 208 ntBASIC6.28□□□□□ -1.4
Sox1P53783 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox1P53783 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sox1P53783 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sox1P53783 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sox1P53783 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sox1P53783 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox1P53783 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
Sox1P53783 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.28□□□□□ -1.4
Sox1P53783 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.28□□□□□ -1.4
Sox1P53783 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Sox1P53783 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sox1P53783 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Sox1P53783 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sox1P53783 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.28□□□□□ -1.4
Sox1P53783 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox1P53783 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sox1P53783 Gm13712-201ENSMUST00000117484 2295 ntBASIC6.28□□□□□ -1.4
Sox1P53783 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox1P53783 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.28□□□□□ -1.4
Sox1P53783 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox1P53783 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.27□□□□□ -1.4
Sox1P53783 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.4
Sox1P53783 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.4
Sox1P53783 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
Sox1P53783 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Sox1P53783 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sox1P53783 Gm37206-201ENSMUST00000195512 3069 ntBASIC6.27□□□□□ -1.41
Sox1P53783 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sox1P53783 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms