Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sdc2P43407 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Sdc2P43407 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Sdc2P43407 Gm45223-201ENSMUST00000207037 5138 ntBASIC5.04□□□□□ -1.6
Sdc2P43407 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc2P43407 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Sdc2P43407 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc2P43407 Hm629797-201ENSMUST00000183645 2398 ntBASIC5.04□□□□□ -1.6
Sdc2P43407 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Sdc2P43407 Gm22498-201ENSMUST00000104497 86 ntBASIC5.04□□□□□ -1.6
Sdc2P43407 n-R5s16-201ENSMUST00000104555 119 ntBASIC5.04□□□□□ -1.6
Sdc2P43407 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC5.04□□□□□ -1.6
Sdc2P43407 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.04□□□□□ -1.6
Sdc2P43407 Gm24628-201ENSMUST00000122761 289 ntBASIC5.04□□□□□ -1.6
Sdc2P43407 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.04□□□□□ -1.6
Sdc2P43407 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc2P43407 Gm24251-201ENSMUST00000157324 114 ntBASIC5.04□□□□□ -1.6
Sdc2P43407 Gm25383-201ENSMUST00000157810 144 ntBASIC5.04□□□□□ -1.6
Sdc2P43407 Gm24402-201ENSMUST00000157873 91 ntBASIC5.04□□□□□ -1.6
Sdc2P43407 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
Sdc2P43407 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Sdc2P43407 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Sdc2P43407 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.04□□□□□ -1.6
Sdc2P43407 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc2P43407 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC5.04□□□□□ -1.6
Sdc2P43407 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Sdc2P43407 Gm29036-201ENSMUST00000189967 877 ntBASIC5.04□□□□□ -1.6
Sdc2P43407 Gm42579-201ENSMUST00000200512 734 ntBASIC5.04□□□□□ -1.6
Sdc2P43407 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC5.04□□□□□ -1.6
Sdc2P43407 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Sdc2P43407 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Sdc2P43407 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Sdc2P43407 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Sdc2P43407 Gm23626-201ENSMUST00000082458 133 ntBASIC5.04□□□□□ -1.6
Sdc2P43407 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Sdc2P43407 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Sdc2P43407 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc2P43407 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc2P43407 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc2P43407 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC5.04□□□□□ -1.6
Sdc2P43407 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Sdc2P43407 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sdc2P43407 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc2P43407 Gm38057-201ENSMUST00000195551 3203 ntBASIC5.03□□□□□ -1.6
Sdc2P43407 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Sdc2P43407 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Sdc2P43407 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Sdc2P43407 Gm22968-201ENSMUST00000157955 118 ntBASIC5.03□□□□□ -1.6
Sdc2P43407 Gm24188-201ENSMUST00000157980 108 ntBASIC5.03□□□□□ -1.6
Sdc2P43407 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.03□□□□□ -1.6
Sdc2P43407 Mir7022-201ENSMUST00000183749 61 ntBASIC5.03□□□□□ -1.6
Sdc2P43407 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Sdc2P43407 Gm27165-201ENSMUST00000183951 232 ntBASIC5.03□□□□□ -1.6
Sdc2P43407 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.03□□□□□ -1.6
Sdc2P43407 Gm18350-201ENSMUST00000187395 955 ntBASIC5.03□□□□□ -1.6
Sdc2P43407 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC5.03□□□□□ -1.6
Sdc2P43407 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC5.03□□□□□ -1.6
Sdc2P43407 Gm37961-201ENSMUST00000192729 299 ntBASIC5.03□□□□□ -1.6
Sdc2P43407 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc2P43407 Gm7439-201ENSMUST00000214053 835 ntBASIC5.03□□□□□ -1.6
Sdc2P43407 AC153936.1-201ENSMUST00000219874 395 ntBASIC5.03□□□□□ -1.6
Sdc2P43407 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.03□□□□□ -1.6
Sdc2P43407 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc2P43407 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.03□□□□□ -1.6
Sdc2P43407 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Sdc2P43407 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc2P43407 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Sdc2P43407 Gm38106-201ENSMUST00000194107 2534 ntBASIC5.02□□□□□ -1.61
Sdc2P43407 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC5.02□□□□□ -1.61
Sdc2P43407 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sdc2P43407 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc2P43407 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.02□□□□□ -1.61
Sdc2P43407 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sdc2P43407 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC5.02□□□□□ -1.61
Sdc2P43407 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc2P43407 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sdc2P43407 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC5.02□□□□□ -1.61
Sdc2P43407 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc2P43407 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC5.02□□□□□ -1.61
Sdc2P43407 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc2P43407 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc2P43407 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc2P43407 Gm29138-201ENSMUST00000191444 348 ntBASIC5.02□□□□□ -1.61
Sdc2P43407 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc2P43407 Gm17775-201ENSMUST00000198542 258 ntBASIC5.02□□□□□ -1.61
Sdc2P43407 Gm43580-201ENSMUST00000202892 284 ntBASIC5.02□□□□□ -1.61
Sdc2P43407 Gm19596-201ENSMUST00000203685 739 ntBASIC5.02□□□□□ -1.61
Sdc2P43407 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC5.02□□□□□ -1.61
Sdc2P43407 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.02□□□□□ -1.61
Sdc2P43407 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.02□□□□□ -1.61
Sdc2P43407 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC5.02□□□□□ -1.61
Sdc2P43407 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sdc2P43407 Gm22220-201ENSMUST00000082671 149 ntBASIC5.02□□□□□ -1.61
Sdc2P43407 Mir202-201ENSMUST00000083568 72 ntBASIC5.02□□□□□ -1.61
Sdc2P43407 Mir17-201ENSMUST00000083574 84 ntBASIC5.02□□□□□ -1.61
Sdc2P43407 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sdc2P43407 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Sdc2P43407 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sdc2P43407 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sdc2P43407 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms