Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Foxa1P35582 Gm37908-201ENSMUST00000195828 470 ntBASIC4.36□□□□□ -1.71
Foxa1P35582 Gm42663-201ENSMUST00000199883 351 ntBASIC4.36□□□□□ -1.71
Foxa1P35582 Gm42458-201ENSMUST00000201914 369 ntBASIC4.36□□□□□ -1.71
Foxa1P35582 Gm44261-201ENSMUST00000203337 209 ntBASIC4.36□□□□□ -1.71
Foxa1P35582 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC4.36□□□□□ -1.71
Foxa1P35582 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC4.36□□□□□ -1.71
Foxa1P35582 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.36□□□□□ -1.71
Foxa1P35582 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.36□□□□□ -1.71
Foxa1P35582 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Foxa1P35582 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Foxa1P35582 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Foxa1P35582 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Foxa1P35582 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
Foxa1P35582 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
Foxa1P35582 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.36□□□□□ -1.71
Foxa1P35582 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Foxa1P35582 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Foxa1P35582 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Foxa1P35582 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Foxa1P35582 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Foxa1P35582 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Foxa1P35582 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Foxa1P35582 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Foxa1P35582 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Foxa1P35582 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.35□□□□□ -1.71
Foxa1P35582 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Foxa1P35582 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Foxa1P35582 Gm23879-201ENSMUST00000116874 126 ntBASIC4.35□□□□□ -1.71
Foxa1P35582 Gm16089-201ENSMUST00000117679 336 ntBASIC4.35□□□□□ -1.71
Foxa1P35582 Gm15766-201ENSMUST00000118025 813 ntBASIC4.35□□□□□ -1.71
Foxa1P35582 Gm7312-201ENSMUST00000118798 469 ntBASIC4.35□□□□□ -1.71
Foxa1P35582 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Foxa1P35582 Gm13430-201ENSMUST00000121366 288 ntBASIC4.35□□□□□ -1.71
Foxa1P35582 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC4.35□□□□□ -1.71
Foxa1P35582 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Foxa1P35582 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Foxa1P35582 Gm22819-201ENSMUST00000157445 303 ntBASIC4.35□□□□□ -1.71
Foxa1P35582 Gm26310-201ENSMUST00000157766 117 ntBASIC4.35□□□□□ -1.71
Foxa1P35582 Gm25923-201ENSMUST00000158312 138 ntBASIC4.35□□□□□ -1.71
Foxa1P35582 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Foxa1P35582 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Foxa1P35582 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Foxa1P35582 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Foxa1P35582 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Foxa1P35582 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Foxa1P35582 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Foxa1P35582 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Foxa1P35582 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC4.35□□□□□ -1.71
Foxa1P35582 Gm28660-201ENSMUST00000186496 253 ntBASIC4.35□□□□□ -1.71
Foxa1P35582 Mrgprb13-201ENSMUST00000188191 985 ntBASIC4.35□□□□□ -1.71
Foxa1P35582 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC4.35□□□□□ -1.71
Foxa1P35582 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC4.35□□□□□ -1.71
Foxa1P35582 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Foxa1P35582 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.35□□□□□ -1.71
Foxa1P35582 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC4.35□□□□□ -1.71
Foxa1P35582 AC154296.3-201ENSMUST00000214427 712 ntBASIC4.35□□□□□ -1.71
Foxa1P35582 AC142113.2-201ENSMUST00000217425 748 ntBASIC4.35□□□□□ -1.71
Foxa1P35582 Gm272-201ENSMUST00000222073 919 ntBASIC4.35□□□□□ -1.71
Foxa1P35582 Gm5457-201ENSMUST00000022260 333 ntBASIC4.35□□□□□ -1.71
Foxa1P35582 AC154838.2-201ENSMUST00000226602 747 ntBASIC4.35□□□□□ -1.71
Foxa1P35582 AC131997.2-201ENSMUST00000227452 362 ntBASIC4.35□□□□□ -1.71
Foxa1P35582 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Foxa1P35582 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Foxa1P35582 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Foxa1P35582 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Foxa1P35582 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.35□□□□□ -1.71
Foxa1P35582 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.35□□□□□ -1.71
Foxa1P35582 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Foxa1P35582 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Foxa1P35582 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Foxa1P35582 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Foxa1P35582 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Foxa1P35582 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.34□□□□□ -1.71
Foxa1P35582 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Foxa1P35582 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Foxa1P35582 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Foxa1P35582 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Foxa1P35582 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
Foxa1P35582 Gm24117-201ENSMUST00000103973 133 ntBASIC4.34□□□□□ -1.71
Foxa1P35582 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.34□□□□□ -1.71
Foxa1P35582 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.34□□□□□ -1.71
Foxa1P35582 Gm11366-201ENSMUST00000119279 429 ntBASIC4.34□□□□□ -1.71
Foxa1P35582 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.34□□□□□ -1.71
Foxa1P35582 Gm15905-201ENSMUST00000137042 298 ntBASIC4.34□□□□□ -1.71
Foxa1P35582 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Foxa1P35582 Gm22529-201ENSMUST00000158817 123 ntBASIC4.34□□□□□ -1.71
Foxa1P35582 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Foxa1P35582 Gm20657-201ENSMUST00000177079 515 ntBASIC4.34□□□□□ -1.71
Foxa1P35582 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
Foxa1P35582 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Foxa1P35582 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Foxa1P35582 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
Foxa1P35582 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC4.34□□□□□ -1.71
Foxa1P35582 Gm42502-201ENSMUST00000198550 1089 ntBASIC4.34□□□□□ -1.71
Foxa1P35582 Gm43309-201ENSMUST00000200837 458 ntBASIC4.34□□□□□ -1.71
Foxa1P35582 Gm2522-201ENSMUST00000204280 322 ntBASIC4.34□□□□□ -1.71
Foxa1P35582 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.34□□□□□ -1.71
Foxa1P35582 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Foxa1P35582 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms