Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.14□□□□□ -1.43
Hoxd9P28357 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC6.14□□□□□ -1.43
Hoxd9P28357 Gm43355-201ENSMUST00000196541 346 ntBASIC6.14□□□□□ -1.43
Hoxd9P28357 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Hoxd9P28357 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC6.14□□□□□ -1.43
Hoxd9P28357 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd9P28357 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.14□□□□□ -1.43
Hoxd9P28357 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC6.14□□□□□ -1.43
Hoxd9P28357 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd9P28357 Gm3442-201ENSMUST00000216808 710 ntBASIC6.14□□□□□ -1.43
Hoxd9P28357 Gm3266-201ENSMUST00000217832 591 ntBASIC6.14□□□□□ -1.43
Hoxd9P28357 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC6.14□□□□□ -1.43
Hoxd9P28357 AC154257.2-201ENSMUST00000224166 340 ntBASIC6.14□□□□□ -1.43
Hoxd9P28357 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.14□□□□□ -1.43
Hoxd9P28357 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Hoxd9P28357 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd9P28357 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd9P28357 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.14□□□□□ -1.43
Hoxd9P28357 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd9P28357 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Hoxd9P28357 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd9P28357 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd9P28357 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Hoxd9P28357 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Hoxd9P28357 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.14□□□□□ -1.43
Hoxd9P28357 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Hoxd9P28357 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Hoxd9P28357 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Hoxd9P28357 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hoxd9P28357 Gm14912-201ENSMUST00000120166 1773 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd9P28357 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd9P28357 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd9P28357 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd9P28357 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd9P28357 Mir708-201ENSMUST00000102189 109 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm15076-201ENSMUST00000117076 474 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm14575-201ENSMUST00000117210 560 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm11972-201ENSMUST00000118514 389 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm11759-201ENSMUST00000121742 464 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm14747-201ENSMUST00000149888 984 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm23674-201ENSMUST00000157473 131 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hoxd9P28357 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm25451-201ENSMUST00000177832 121 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm25244-201ENSMUST00000178089 132 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd9P28357 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm20923-201ENSMUST00000190009 319 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Ighv12-2-201ENSMUST00000191949 362 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm43494-201ENSMUST00000197672 388 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm9057-201ENSMUST00000198791 296 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm44374-201ENSMUST00000199821 140 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm45150-201ENSMUST00000206051 467 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm9685-201ENSMUST00000211275 538 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm45727-201ENSMUST00000212886 572 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC6.13□□□□□ -1.43
Hoxd9P28357 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm7413-201ENSMUST00000219498 462 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm32526-201ENSMUST00000221878 981 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm18247-201ENSMUST00000222937 601 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Hoxd9P28357 AV026068-231ENSMUST00000225862 482 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 AC166574.3-201ENSMUST00000226725 367 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd9P28357 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd9P28357 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hoxd9P28357 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd9P28357 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd9P28357 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd9P28357 Gm43921-201ENSMUST00000204296 1792 ntBASIC6.13□□□□□ -1.43
Hoxd9P28357 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms