Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col1a1P11087 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.47□□□□□ -1.53
Col1a1P11087 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Col1a1P11087 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Col1a1P11087 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Col1a1P11087 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC5.46□□□□□ -1.53
Col1a1P11087 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Col1a1P11087 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
Col1a1P11087 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC5.46□□□□□ -1.53
Col1a1P11087 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Col1a1P11087 Gm26219-201ENSMUST00000175216 71 ntBASIC5.46□□□□□ -1.53
Col1a1P11087 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.46□□□□□ -1.53
Col1a1P11087 Gm18016-201ENSMUST00000216119 801 ntBASIC5.46□□□□□ -1.53
Col1a1P11087 AC110816.1-201ENSMUST00000218559 980 ntBASIC5.46□□□□□ -1.53
Col1a1P11087 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Col1a1P11087 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
Col1a1P11087 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
Col1a1P11087 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Col1a1P11087 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Col1a1P11087 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col1a1P11087 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.46□□□□□ -1.54
Col1a1P11087 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Col1a1P11087 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.46□□□□□ -1.54
Col1a1P11087 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.46□□□□□ -1.54
Col1a1P11087 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.46□□□□□ -1.54
Col1a1P11087 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Col1a1P11087 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col1a1P11087 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC5.46□□□□□ -1.54
Col1a1P11087 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC5.46□□□□□ -1.54
Col1a1P11087 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC5.46□□□□□ -1.54
Col1a1P11087 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Col1a1P11087 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Col1a1P11087 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Col1a1P11087 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.46□□□□□ -1.54
Col1a1P11087 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Col1a1P11087 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Col1a1P11087 Gm22269-201ENSMUST00000104002 130 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Gm11698-201ENSMUST00000117948 455 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Gm12820-201ENSMUST00000119233 342 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Gm1866-201ENSMUST00000120701 477 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.45□□□□□ -1.54
Col1a1P11087 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Col1a1P11087 Gm27266-201ENSMUST00000184521 123 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.45□□□□□ -1.54
Col1a1P11087 Gm29664-201ENSMUST00000191125 463 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col1a1P11087 Trbv11-201ENSMUST00000194354 260 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Gm45523-201ENSMUST00000210712 799 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Gm18255-201ENSMUST00000211316 765 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Gm45727-201ENSMUST00000212886 572 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC5.45□□□□□ -1.54
Col1a1P11087 AC119241.1-201ENSMUST00000223651 534 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Gm26165-201ENSMUST00000083791 138 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col1a1P11087 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col1a1P11087 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col1a1P11087 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
Col1a1P11087 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col1a1P11087 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col1a1P11087 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Col1a1P11087 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col1a1P11087 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
Col1a1P11087 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Col1a1P11087 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Col1a1P11087 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col1a1P11087 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col1a1P11087 Gm15185-201ENSMUST00000117397 746 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Gm11313-201ENSMUST00000118779 432 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Gm10444-201ENSMUST00000126708 148 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Gm8069-201ENSMUST00000197887 154 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC5.45□□□□□ -1.54
Col1a1P11087 Gm43710-201ENSMUST00000199583 452 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Gm9560-201ENSMUST00000205012 1201 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Gm44871-201ENSMUST00000207821 497 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC5.45□□□□□ -1.54
Col1a1P11087 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Col1a1P11087 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.45□□□□□ -1.54
Col1a1P11087 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.44□□□□□ -1.54
Col1a1P11087 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col1a1P11087 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col1a1P11087 Gm43059-201ENSMUST00000202437 1388 ntBASIC5.44□□□□□ -1.54
Col1a1P11087 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.44□□□□□ -1.54
Col1a1P11087 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
Col1a1P11087 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Col1a1P11087 Gm8734-201ENSMUST00000211669 1312 ntBASIC5.44□□□□□ -1.54
Col1a1P11087 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Col1a1P11087 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Col1a1P11087 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col1a1P11087 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col1a1P11087 Gm15923-201ENSMUST00000119300 1169 ntBASIC5.44□□□□□ -1.54
Col1a1P11087 Gm22986-201ENSMUST00000122753 130 ntBASIC5.44□□□□□ -1.54
Col1a1P11087 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.44□□□□□ -1.54
Col1a1P11087 Gm25846-201ENSMUST00000158013 135 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 135.5 ms