Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gm43389-201ENSMUST00000196080 2595 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm38067-201ENSMUST00000192346 1911 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm24124-201ENSMUST00000104103 132 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm11781-201ENSMUST00000118328 472 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm26098-201ENSMUST00000157247 288 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm22529-201ENSMUST00000158817 123 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm22355-201ENSMUST00000175531 96 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 V1rg10-201ENSMUST00000183378 937 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Mir7006-201ENSMUST00000183624 69 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm4557-201ENSMUST00000185826 907 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm4526-201ENSMUST00000186039 920 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm8708-201ENSMUST00000188500 906 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm19086-201ENSMUST00000190772 665 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm37996-201ENSMUST00000191859 367 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm43524-201ENSMUST00000197278 298 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm32308-201ENSMUST00000203053 280 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm2522-201ENSMUST00000204280 322 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm6776-201ENSMUST00000057752 900 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Upk3aQ9JKX8 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm14619-201ENSMUST00000120480 168 ntBASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Mir3090-201ENSMUST00000175597 87 ntBASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm27636-201ENSMUST00000184528 122 ntBASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm37123-201ENSMUST00000192994 1171 ntBASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm43144-201ENSMUST00000198256 485 ntBASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 AC153794.2-201ENSMUST00000222650 550 ntBASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 AC132260.2-201ENSMUST00000224482 344 ntBASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 AC127371.2-201ENSMUST00000228108 1933 ntBASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Upk3aQ9JKX8 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms