Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Smc1aQ9CU62 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Smc1aQ9CU62 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Smc1aQ9CU62 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Smc1aQ9CU62 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Smc1aQ9CU62 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Smc1aQ9CU62 Gm14046-201ENSMUST00000119389 509 ntBASIC5.54□□□□□ -1.52
Smc1aQ9CU62 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Smc1aQ9CU62 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Smc1aQ9CU62 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Smc1aQ9CU62 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Smc1aQ9CU62 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.54□□□□□ -1.52
Smc1aQ9CU62 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Smc1aQ9CU62 V1rg10-201ENSMUST00000183378 937 ntBASIC5.54□□□□□ -1.52
Smc1aQ9CU62 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Smc1aQ9CU62 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.54□□□□□ -1.52
Smc1aQ9CU62 Gm34224-201ENSMUST00000204606 364 ntBASIC5.54□□□□□ -1.52
Smc1aQ9CU62 Gm18924-201ENSMUST00000211929 316 ntBASIC5.54□□□□□ -1.52
Smc1aQ9CU62 AC105407.3-201ENSMUST00000224161 648 ntBASIC5.54□□□□□ -1.52
Smc1aQ9CU62 CT030662.3-201ENSMUST00000228751 476 ntBASIC5.54□□□□□ -1.52
Smc1aQ9CU62 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Smc1aQ9CU62 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Smc1aQ9CU62 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.54□□□□□ -1.52
Smc1aQ9CU62 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.54□□□□□ -1.52
Smc1aQ9CU62 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Smc1aQ9CU62 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Smc1aQ9CU62 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Smc1aQ9CU62 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Gm23746-201ENSMUST00000104229 125 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Gm13213-201ENSMUST00000119668 474 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Gm15780-201ENSMUST00000121283 935 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Gm12332-201ENSMUST00000121397 922 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Gm12422-201ENSMUST00000121431 302 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Gm12807-201ENSMUST00000121546 962 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Gm13149-201ENSMUST00000122071 339 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Gm24628-201ENSMUST00000122761 289 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Gm25271-201ENSMUST00000157273 290 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Gm23993-201ENSMUST00000157478 144 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Gm23318-201ENSMUST00000158000 108 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Mir3058-201ENSMUST00000175126 91 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Gm23633-201ENSMUST00000175293 119 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Mir6943-201ENSMUST00000185186 66 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Gm42458-201ENSMUST00000201914 369 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Gm18899-201ENSMUST00000217663 546 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.53□□□□□ -1.52
Smc1aQ9CU62 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 AC154851.2-201ENSMUST00000222172 644 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Ap3m1-208ENSMUST00000224016 764 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 AC154634.3-201ENSMUST00000224589 736 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Gm16415-201ENSMUST00000080097 489 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Gm24763-201ENSMUST00000083688 190 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Smc1aQ9CU62 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Gm37124-201ENSMUST00000192140 1992 ntBASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Smc1aQ9CU62 Gm42645-201ENSMUST00000201573 1627 ntBASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Gm26376-201ENSMUST00000104784 110 ntBASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Gm15012-201ENSMUST00000119176 106 ntBASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Gm13808-201ENSMUST00000121353 184 ntBASIC5.52□□□□□ -1.53
Smc1aQ9CU62 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Gm2622-201ENSMUST00000200018 471 ntBASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Gm7721-201ENSMUST00000200446 546 ntBASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Gm44259-201ENSMUST00000204996 298 ntBASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Gm4574-201ENSMUST00000207804 542 ntBASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Smc1aQ9CU62 AC121986.1-201ENSMUST00000218588 781 ntBASIC5.52□□□□□ -1.53
Smc1aQ9CU62 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.52□□□□□ -1.53
Smc1aQ9CU62 AC154838.2-201ENSMUST00000226602 747 ntBASIC5.52□□□□□ -1.53
Smc1aQ9CU62 CT030662.2-201ENSMUST00000226942 805 ntBASIC5.52□□□□□ -1.53
Smc1aQ9CU62 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Gm23796-201ENSMUST00000084011 160 ntBASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Smc1aQ9CU62 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Smc1aQ9CU62 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 106.2 ms