Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Gm45700-201ENSMUST00000205866 347 ntBASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Glud-ps-201ENSMUST00000206310 657 ntBASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Gm18510-201ENSMUST00000219335 1096 ntBASIC6.11□□□□□ -1.43
Vps53Q8CCB4 CT010486.1-201ENSMUST00000224609 422 ntBASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Gm22456-201ENSMUST00000082578 125 ntBASIC6.11□□□□□ -1.43
Vps53Q8CCB4 n-R5s205-201ENSMUST00000083149 125 ntBASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Mir129-1-201ENSMUST00000083535 73 ntBASIC6.11□□□□□ -1.43
Vps53Q8CCB4 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 AC192616.2-201ENSMUST00000221482 3841 ntBASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 AC122408.2-201ENSMUST00000217901 1391 ntBASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Gm37311-201ENSMUST00000195541 2024 ntBASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Gm11550-201ENSMUST00000118210 699 ntBASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Gm11797-201ENSMUST00000121336 754 ntBASIC6.1□□□□□ -1.43
Vps53Q8CCB4 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Gm15812-201ENSMUST00000162331 748 ntBASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Gm25534-201ENSMUST00000175365 125 ntBASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Gm27033-201ENSMUST00000183226 544 ntBASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Gm27817-201ENSMUST00000184302 233 ntBASIC6.1□□□□□ -1.43
Vps53Q8CCB4 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Gm37987-201ENSMUST00000194999 825 ntBASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Gm37989-201ENSMUST00000195202 803 ntBASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Gm43104-201ENSMUST00000197234 311 ntBASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Gm31520-201ENSMUST00000203048 733 ntBASIC6.1□□□□□ -1.43
Vps53Q8CCB4 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 AC168880.1-201ENSMUST00000225113 707 ntBASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Gm23511-201ENSMUST00000083084 164 ntBASIC6.1□□□□□ -1.43
Vps53Q8CCB4 CT025556.1-201ENSMUST00000222965 1884 ntBASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 AC154640.4-201ENSMUST00000226647 4640 ntBASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Gm37181-201ENSMUST00000192513 1727 ntBASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Gm16421-201ENSMUST00000117616 1557 ntBASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Vps53Q8CCB4 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Gm14576-201ENSMUST00000118073 1111 ntBASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Gm23211-201ENSMUST00000122717 308 ntBASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Gm23513-201ENSMUST00000158181 133 ntBASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Vps53Q8CCB4 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC6.09□□□□□ -1.43
Vps53Q8CCB4 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Gm37884-201ENSMUST00000191857 818 ntBASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Gm37421-201ENSMUST00000193088 132 ntBASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Gm38333-201ENSMUST00000193608 604 ntBASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Gm17838-201ENSMUST00000205872 876 ntBASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Vps53Q8CCB4 AC117240.2-201ENSMUST00000220921 263 ntBASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Gm8288-201ENSMUST00000223406 593 ntBASIC6.09□□□□□ -1.43
Vps53Q8CCB4 CT010480.1-201ENSMUST00000223612 363 ntBASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Gm4963-201ENSMUST00000072718 378 ntBASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Vps53Q8CCB4 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms