Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Gm15038-201ENSMUST00000122144 296 ntBASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 AC124556.1-201ENSMUST00000218256 1319 ntBASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Gm29112-201ENSMUST00000188962 3487 ntBASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Gm26075-201ENSMUST00000104062 121 ntBASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Gm24403-201ENSMUST00000104616 130 ntBASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Gm22940-201ENSMUST00000158560 155 ntBASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Gm26005-201ENSMUST00000158802 134 ntBASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Gm44354-201ENSMUST00000196017 143 ntBASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Gm45392-201ENSMUST00000210441 214 ntBASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Gm46190-201ENSMUST00000219650 427 ntBASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Gm43523-201ENSMUST00000197397 2878 ntBASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Gm13250-201ENSMUST00000117209 753 ntBASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Gm17152-201ENSMUST00000172430 535 ntBASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Mir5134-201ENSMUST00000175529 78 ntBASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Gm4557-201ENSMUST00000185826 907 ntBASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Gm4526-201ENSMUST00000186039 920 ntBASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Gm8708-201ENSMUST00000188500 906 ntBASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Mir129b-201ENSMUST00000197461 65 ntBASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Gm7034-201ENSMUST00000218638 645 ntBASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Gm19134-201ENSMUST00000221203 487 ntBASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 AC164618.1-201ENSMUST00000225769 592 ntBASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 AC159326.1-201ENSMUST00000219989 1302 ntBASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 AC155167.2-201ENSMUST00000226127 1945 ntBASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 AC163032.1-201ENSMUST00000220671 2970 ntBASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 AC156163.1-201ENSMUST00000215598 3369 ntBASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col6a6Q8C6K9 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 Gm14775-201ENSMUST00000122089 310 ntBASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 Gm26490-201ENSMUST00000157879 140 ntBASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 Gm44816-201ENSMUST00000206666 477 ntBASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 Gm6065-201ENSMUST00000081336 492 ntBASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 Gm6043-201ENSMUST00000099961 492 ntBASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 AC122769.3-201ENSMUST00000227739 3245 ntBASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a6Q8C6K9 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms