Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC8.04□□□□□ -1.12
Trim35Q8C006 Gm15585-201ENSMUST00000149696 670 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim35Q8C006 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC8.04□□□□□ -1.12
Trim35Q8C006 Gm26048-201ENSMUST00000157305 142 ntBASIC8.04□□□□□ -1.12
Trim35Q8C006 Gm15849-201ENSMUST00000159257 335 ntTSL 3 BASIC8.04□□□□□ -1.12
Trim35Q8C006 Gm6214-201ENSMUST00000178845 541 ntBASIC8.04□□□□□ -1.12
Trim35Q8C006 Gm8807-201ENSMUST00000179328 492 ntBASIC8.04□□□□□ -1.12
Trim35Q8C006 Gm29175-201ENSMUST00000189500 402 ntBASIC8.04□□□□□ -1.12
Trim35Q8C006 Gm28444-201ENSMUST00000190777 2137 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim35Q8C006 Gm5981-201ENSMUST00000199912 487 ntBASIC8.04□□□□□ -1.12
Trim35Q8C006 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC8.04□□□□□ -1.12
Trim35Q8C006 CT010449.1-201ENSMUST00000220624 153 ntBASIC8.04□□□□□ -1.12
Trim35Q8C006 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim35Q8C006 Gm18413-201ENSMUST00000221573 655 ntBASIC8.04□□□□□ -1.12
Trim35Q8C006 AC163041.2-201ENSMUST00000223082 573 ntBASIC8.04□□□□□ -1.12
Trim35Q8C006 AC141884.1-201ENSMUST00000226327 636 ntBASIC8.04□□□□□ -1.12
Trim35Q8C006 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC8.04□□□□□ -1.12
Trim35Q8C006 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC8.04□□□□□ -1.12
Trim35Q8C006 Gm8526-201ENSMUST00000079153 475 ntBASIC8.04□□□□□ -1.12
Trim35Q8C006 Gm24697-201ENSMUST00000083881 107 ntBASIC8.04□□□□□ -1.12
Trim35Q8C006 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC8.04□□□□□ -1.12
Trim35Q8C006 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim35Q8C006 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Trim35Q8C006 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC8.04□□□□□ -1.12
Trim35Q8C006 Gm42981-201ENSMUST00000200184 3252 ntBASIC8.04□□□□□ -1.12
Trim35Q8C006 AC107453.1-201ENSMUST00000227490 3268 ntBASIC8.04□□□□□ -1.12
Trim35Q8C006 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim35Q8C006 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim35Q8C006 Zfp474-202ENSMUST00000209270 2113 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim35Q8C006 Zscan21-205ENSMUST00000110961 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim35Q8C006 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim35Q8C006 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Trim35Q8C006 Tbc1d24-208ENSMUST00000201089 4081 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim35Q8C006 Fignl1-201ENSMUST00000047689 2961 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim35Q8C006 Gm37894-201ENSMUST00000195416 2599 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim35Q8C006 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
Trim35Q8C006 Gm15297-201ENSMUST00000117795 290 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 Gm13526-201ENSMUST00000117970 189 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 Gm12086-201ENSMUST00000120863 228 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 Gm13424-201ENSMUST00000122301 354 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 Gm15335-201ENSMUST00000122442 411 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Trim35Q8C006 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC8.03□□□□□ -1.12
Trim35Q8C006 Gm24748-201ENSMUST00000157836 108 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC8.03□□□□□ -1.12
Trim35Q8C006 Gm26980-201ENSMUST00000183321 395 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 Mir6239-201ENSMUST00000183564 105 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC8.03□□□□□ -1.12
Trim35Q8C006 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim35Q8C006 Gm37617-201ENSMUST00000194309 159 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 Gm19148-201ENSMUST00000197045 429 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 Gm42458-201ENSMUST00000201914 369 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim35Q8C006 AC093926.1-201ENSMUST00000213730 243 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim35Q8C006 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim35Q8C006 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC8.03□□□□□ -1.12
Trim35Q8C006 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC8.03□□□□□ -1.12
Trim35Q8C006 Gm7093-201ENSMUST00000223004 581 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 AC192088.3-201ENSMUST00000227858 831 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 Gm26439-201ENSMUST00000082592 106 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 Snora30-201ENSMUST00000083325 130 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim35Q8C006 AC131586.2-202ENSMUST00000227016 2705 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim35Q8C006 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim35Q8C006 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim35Q8C006 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim35Q8C006 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim35Q8C006 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim35Q8C006 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim35Q8C006 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim35Q8C006 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim35Q8C006 Vmn2r92-201ENSMUST00000169686 2583 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim35Q8C006 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC8.03□□□□□ -1.12
Trim35Q8C006 Gm44022-201ENSMUST00000203708 5429 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 AC137842.3-201ENSMUST00000228855 2397 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 Tmem209-203ENSMUST00000115157 2273 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim35Q8C006 Gm11870-201ENSMUST00000119255 1322 ntBASIC8.03□□□□□ -1.12
Trim35Q8C006 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim35Q8C006 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Trim35Q8C006 Slc18b1-201ENSMUST00000119597 2837 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
Trim35Q8C006 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim35Q8C006 Gm38315-201ENSMUST00000194286 2437 ntBASIC8.02□□□□□ -1.13
Trim35Q8C006 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms