Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Vaultrc5-201ENSMUST00000083211 143 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm43369-201ENSMUST00000196373 1552 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 AC163660.3-201ENSMUST00000224253 1563 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm45179-201ENSMUST00000208452 4337 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gm22478-201ENSMUST00000122570 154 ntBASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gm26346-201ENSMUST00000157525 329 ntBASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gm23542-201ENSMUST00000158208 96 ntBASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gm28412-201ENSMUST00000187243 177 ntBASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gm37475-201ENSMUST00000193107 1015 ntBASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gm43370-201ENSMUST00000196437 284 ntBASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gm5853-201ENSMUST00000197183 632 ntBASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gm44361-201ENSMUST00000197960 94 ntBASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gm45034-201ENSMUST00000206831 482 ntBASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gm2996-201ENSMUST00000211398 537 ntBASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 AC112680.2-201ENSMUST00000213119 595 ntBASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 AC104832.1-201ENSMUST00000222938 550 ntBASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 AC114572.1-201ENSMUST00000227262 300 ntBASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gm23975-201ENSMUST00000082685 106 ntBASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Gm13340-201ENSMUST00000117219 1545 ntBASIC6.2□□□□□ -1.42
Sh3rf1Q69ZI1 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Gm26002-201ENSMUST00000101915 107 ntBASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Lipe-203ENSMUST00000105177 1251 ntBASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Mir467h-201ENSMUST00000116759 121 ntBASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Gm14995-201ENSMUST00000117135 391 ntBASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Gm12924-201ENSMUST00000121747 318 ntBASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Gm9593-201ENSMUST00000166034 469 ntBASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Gm3216-201ENSMUST00000166927 486 ntBASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Gm5709-201ENSMUST00000177879 1165 ntBASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Gm28016-201ENSMUST00000184594 196 ntBASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Gm37477-201ENSMUST00000195215 884 ntBASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Gm43655-201ENSMUST00000197367 222 ntBASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Gm17987-201ENSMUST00000206902 603 ntBASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Olfr1309-201ENSMUST00000207885 964 ntBASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Gm6009-201ENSMUST00000210848 280 ntBASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 Gm9237-201ENSMUST00000221499 548 ntBASIC6.19□□□□□ -1.42
Sh3rf1Q69ZI1 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 106.7 ms