Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Trim28Q62318 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim28Q62318 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim28Q62318 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Trim28Q62318 Gm22020-201ENSMUST00000104358 136 ntBASIC6.58□□□□□ -1.36
Trim28Q62318 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC6.58□□□□□ -1.36
Trim28Q62318 Gm25103-201ENSMUST00000122671 318 ntBASIC6.58□□□□□ -1.36
Trim28Q62318 Gm24628-201ENSMUST00000122761 289 ntBASIC6.58□□□□□ -1.36
Trim28Q62318 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim28Q62318 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC6.58□□□□□ -1.36
Trim28Q62318 Gm3362-201ENSMUST00000148102 466 ntBASIC6.58□□□□□ -1.36
Trim28Q62318 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC6.58□□□□□ -1.36
Trim28Q62318 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim28Q62318 Gm27755-201ENSMUST00000184623 132 ntBASIC6.58□□□□□ -1.36
Trim28Q62318 Gm37966-201ENSMUST00000193122 326 ntBASIC6.58□□□□□ -1.36
Trim28Q62318 Gm10292-202ENSMUST00000193165 585 ntBASIC6.58□□□□□ -1.36
Trim28Q62318 Gm37070-201ENSMUST00000193272 460 ntBASIC6.58□□□□□ -1.36
Trim28Q62318 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim28Q62318 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC6.58□□□□□ -1.36
Trim28Q62318 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC6.58□□□□□ -1.36
Trim28Q62318 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim28Q62318 Gm44232-201ENSMUST00000204537 225 ntBASIC6.58□□□□□ -1.36
Trim28Q62318 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim28Q62318 Gm45458-201ENSMUST00000209900 522 ntBASIC6.58□□□□□ -1.36
Trim28Q62318 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim28Q62318 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim28Q62318 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim28Q62318 Gm8264-201ENSMUST00000217801 465 ntBASIC6.58□□□□□ -1.36
Trim28Q62318 Gm8158-201ENSMUST00000219220 465 ntBASIC6.58□□□□□ -1.36
Trim28Q62318 Gm8112-201ENSMUST00000219637 465 ntBASIC6.58□□□□□ -1.36
Trim28Q62318 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim28Q62318 AC125399.1-201ENSMUST00000224236 595 ntBASIC6.58□□□□□ -1.36
Trim28Q62318 BC023105-201ENSMUST00000073997 1227 ntBASIC6.58□□□□□ -1.36
Trim28Q62318 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim28Q62318 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim28Q62318 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim28Q62318 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
Trim28Q62318 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim28Q62318 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim28Q62318 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC6.58□□□□□ -1.36
Trim28Q62318 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim28Q62318 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim28Q62318 Gm45129-201ENSMUST00000208444 2224 ntBASIC6.57□□□□□ -1.36
Trim28Q62318 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC6.57□□□□□ -1.36
Trim28Q62318 AC190403.1-201ENSMUST00000224515 1325 ntBASIC6.57□□□□□ -1.36
Trim28Q62318 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trim28Q62318 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.57□□□□□ -1.36
Trim28Q62318 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim28Q62318 Gm22899-201ENSMUST00000104540 131 ntBASIC6.57□□□□□ -1.36
Trim28Q62318 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim28Q62318 Gm13149-201ENSMUST00000122071 339 ntBASIC6.57□□□□□ -1.36
Trim28Q62318 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim28Q62318 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim28Q62318 Gm27033-201ENSMUST00000183226 544 ntBASIC6.57□□□□□ -1.36
Trim28Q62318 Gm18350-201ENSMUST00000187395 955 ntBASIC6.57□□□□□ -1.36
Trim28Q62318 Gm29576-201ENSMUST00000188020 678 ntBASIC6.57□□□□□ -1.36
Trim28Q62318 Gm18177-201ENSMUST00000188373 404 ntBASIC6.57□□□□□ -1.36
Trim28Q62318 Gm28354-201ENSMUST00000190904 678 ntBASIC6.57□□□□□ -1.36
Trim28Q62318 Gm5309-201ENSMUST00000197416 677 ntBASIC6.57□□□□□ -1.36
Trim28Q62318 Gm43005-201ENSMUST00000199015 648 ntBASIC6.57□□□□□ -1.36
Trim28Q62318 Gm42814-201ENSMUST00000199370 460 ntBASIC6.57□□□□□ -1.36
Trim28Q62318 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6.57□□□□□ -1.36
Trim28Q62318 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC6.57□□□□□ -1.36
Trim28Q62318 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim28Q62318 AC125484.1-201ENSMUST00000223218 234 ntBASIC6.57□□□□□ -1.36
Trim28Q62318 AC131745.1-201ENSMUST00000223660 330 ntBASIC6.57□□□□□ -1.36
Trim28Q62318 AC156574.2-201ENSMUST00000228023 282 ntBASIC6.57□□□□□ -1.36
Trim28Q62318 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Trim28Q62318 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Trim28Q62318 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim28Q62318 Gm43887-201ENSMUST00000204727 3186 ntBASIC6.57□□□□□ -1.36
Trim28Q62318 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim28Q62318 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim28Q62318 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim28Q62318 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim28Q62318 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim28Q62318 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trim28Q62318 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC6.57□□□□□ -1.36
Trim28Q62318 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim28Q62318 Gm43281-201ENSMUST00000202522 2704 ntBASIC6.56□□□□□ -1.36
Trim28Q62318 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim28Q62318 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Trim28Q62318 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim28Q62318 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim28Q62318 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC6.56□□□□□ -1.36
Trim28Q62318 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC6.56□□□□□ -1.36
Trim28Q62318 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim28Q62318 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim28Q62318 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim28Q62318 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Trim28Q62318 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim28Q62318 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim28Q62318 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim28Q62318 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim28Q62318 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim28Q62318 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC6.56□□□□□ -1.36
Trim28Q62318 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC6.56□□□□□ -1.36
Trim28Q62318 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC6.56□□□□□ -1.36
Trim28Q62318 Gm13771-201ENSMUST00000117988 238 ntBASIC6.56□□□□□ -1.36
Trim28Q62318 Gm11409-201ENSMUST00000118621 403 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms