Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm25595-201ENSMUST00000102273 97 ntBASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm12683-201ENSMUST00000117528 415 ntBASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm14706-201ENSMUST00000117744 255 ntBASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm12884-201ENSMUST00000120371 325 ntBASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm23964-201ENSMUST00000157966 107 ntBASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm25923-201ENSMUST00000158312 138 ntBASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm24931-201ENSMUST00000158324 107 ntBASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm17046-201ENSMUST00000168078 850 ntBASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Mir3104-201ENSMUST00000174911 63 ntBASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm5372-201ENSMUST00000187540 409 ntBASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm28685-201ENSMUST00000187545 1101 ntBASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm8861-201ENSMUST00000196346 832 ntBASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 AC158523.2-201ENSMUST00000222708 548 ntBASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Gm14711-201ENSMUST00000117056 217 ntBASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Gm16106-201ENSMUST00000119187 294 ntBASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Gm24371-201ENSMUST00000122662 267 ntBASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Gm16250-201ENSMUST00000148974 256 ntBASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Gm25913-201ENSMUST00000157617 135 ntBASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Mir6391-201ENSMUST00000184391 104 ntBASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Gm19206-201ENSMUST00000186401 827 ntBASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Gm6988-201ENSMUST00000222676 375 ntBASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Snord59a-201ENSMUST00000082844 74 ntBASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.1□□□□□ -1.59
Upf3aQ3ULJ3 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 Mir292-201ENSMUST00000104847 82 ntBASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 Gm12039-201ENSMUST00000118219 180 ntBASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 Gm12231-201ENSMUST00000119447 695 ntBASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 Gm24251-201ENSMUST00000157324 114 ntBASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 Gm25427-201ENSMUST00000157605 103 ntBASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 Gm22789-201ENSMUST00000157884 130 ntBASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 Gm9294-201ENSMUST00000165198 789 ntBASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 Gm22395-201ENSMUST00000177427 96 ntBASIC5.09□□□□□ -1.59
Upf3aQ3ULJ3 Gm19898-201ENSMUST00000177490 251 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 155 ms