Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Col17a1Q07563 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Col17a1Q07563 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Col17a1Q07563 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
Col17a1Q07563 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Col17a1Q07563 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Col17a1Q07563 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Col17a1Q07563 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC7.76□□□□□ -1.17
Col17a1Q07563 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col17a1Q07563 Gm29452-201ENSMUST00000187996 313 ntBASIC7.76□□□□□ -1.17
Col17a1Q07563 Gm28860-201ENSMUST00000188103 313 ntBASIC7.76□□□□□ -1.17
Col17a1Q07563 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Col17a1Q07563 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Col17a1Q07563 Gm3213-201ENSMUST00000219296 441 ntBASIC7.76□□□□□ -1.17
Col17a1Q07563 AC154838.1-201ENSMUST00000228944 911 ntBASIC7.76□□□□□ -1.17
Col17a1Q07563 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Col17a1Q07563 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC7.76□□□□□ -1.17
Col17a1Q07563 Gm23686-201ENSMUST00000083241 164 ntBASIC7.76□□□□□ -1.17
Col17a1Q07563 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col17a1Q07563 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC7.76□□□□□ -1.17
Col17a1Q07563 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Col17a1Q07563 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Col17a1Q07563 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Col17a1Q07563 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Col17a1Q07563 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col17a1Q07563 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Col17a1Q07563 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col17a1Q07563 Gm38189-201ENSMUST00000194495 1457 ntBASIC7.76□□□□□ -1.17
Col17a1Q07563 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Col17a1Q07563 Gm12584-201ENSMUST00000117109 1105 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm5757-201ENSMUST00000117494 528 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm14621-201ENSMUST00000117709 689 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm15530-201ENSMUST00000122206 555 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Col17a1Q07563 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm13249-201ENSMUST00000177803 345 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm13144-201ENSMUST00000179385 345 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm27528-201ENSMUST00000183544 205 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm7634-201ENSMUST00000185778 553 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm8939-201ENSMUST00000192577 964 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm44128-201ENSMUST00000204909 219 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm45733-201ENSMUST00000212988 437 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 AC116465.1-201ENSMUST00000220324 235 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 AC138765.1-201ENSMUST00000228657 385 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Col17a1Q07563 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Col17a1Q07563 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm12586-201ENSMUST00000117328 1316 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col17a1Q07563 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col17a1Q07563 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col17a1Q07563 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Col17a1Q07563 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col17a1Q07563 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Col17a1Q07563 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
Col17a1Q07563 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC7.75□□□□□ -1.17
Col17a1Q07563 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Col17a1Q07563 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm4011-201ENSMUST00000174657 2555 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm12379-201ENSMUST00000119607 391 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 n-R5s98-201ENSMUST00000122549 119 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm6673-201ENSMUST00000166114 700 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Mir6344-201ENSMUST00000183462 104 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm18403-201ENSMUST00000192907 529 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm43559-201ENSMUST00000198755 466 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm44320-201ENSMUST00000199276 86 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm45870-201ENSMUST00000211269 601 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 AC140785.1-201ENSMUST00000217782 383 ntBASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC7.75□□□□□ -1.17
Col17a1Q07563 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col17a1Q07563 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col17a1Q07563 Gm13854-201ENSMUST00000121183 1679 ntBASIC7.74□□□□□ -1.17
Col17a1Q07563 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col17a1Q07563 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col17a1Q07563 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col17a1Q07563 Gm38126-201ENSMUST00000195297 4003 ntBASIC7.74□□□□□ -1.17
Col17a1Q07563 Gm43488-201ENSMUST00000198874 2504 ntBASIC7.74□□□□□ -1.17
Col17a1Q07563 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC7.74□□□□□ -1.17
Col17a1Q07563 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col17a1Q07563 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col17a1Q07563 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Col17a1Q07563 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col17a1Q07563 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
Col17a1Q07563 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col17a1Q07563 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC7.74□□□□□ -1.17
Col17a1Q07563 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms