Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Msx2Q03358 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Msx2Q03358 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msx2Q03358 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msx2Q03358 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msx2Q03358 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msx2Q03358 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msx2Q03358 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Msx2Q03358 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Msx2Q03358 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Msx2Q03358 Gm5601-201ENSMUST00000118909 972 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Gm7485-201ENSMUST00000119502 1109 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Gm13627-201ENSMUST00000119700 706 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Gm5287-201ENSMUST00000120666 598 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Gm14919-201ENSMUST00000120839 390 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msx2Q03358 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msx2Q03358 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msx2Q03358 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Msx2Q03358 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msx2Q03358 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Gm24418-201ENSMUST00000177597 79 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Mup-ps7-201ENSMUST00000178292 545 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Gm21959-201ENSMUST00000178439 452 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Gm24639-201ENSMUST00000178518 79 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Mup-ps8-201ENSMUST00000178663 545 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Mup-ps9-201ENSMUST00000178847 545 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Gm23076-201ENSMUST00000179082 79 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Gm25077-201ENSMUST00000179157 79 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Mup-ps6-201ENSMUST00000179564 545 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msx2Q03358 Gm27006-201ENSMUST00000182218 943 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Gm27313-201ENSMUST00000183500 142 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Mir3473f-201ENSMUST00000183743 136 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC5.8□□□□□ -1.48
Msx2Q03358 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msx2Q03358 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC5.8□□□□□ -1.48
Msx2Q03358 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msx2Q03358 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC5.8□□□□□ -1.48
Msx2Q03358 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msx2Q03358 Gm37719-201ENSMUST00000194615 292 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Gm37095-201ENSMUST00000195421 205 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC5.8□□□□□ -1.48
Msx2Q03358 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Gm44604-201ENSMUST00000205475 496 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msx2Q03358 Gm44892-201ENSMUST00000208595 488 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Gm18226-201ENSMUST00000215261 521 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 AC101984.1-201ENSMUST00000219639 402 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC5.8□□□□□ -1.48
Msx2Q03358 AC120540.1-201ENSMUST00000221879 324 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 AC122397.3-201ENSMUST00000227097 527 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Msx2Q03358 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Msx2Q03358 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Msx2Q03358 Gm24043-201ENSMUST00000083108 116 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Gm21286-201ENSMUST00000098035 545 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msx2Q03358 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.8□□□□□ -1.48
Msx2Q03358 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msx2Q03358 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.8□□□□□ -1.48
Msx2Q03358 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC5.8□□□□□ -1.48
Msx2Q03358 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Msx2Q03358 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msx2Q03358 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msx2Q03358 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Msx2Q03358 AC163660.3-201ENSMUST00000224253 1563 ntBASIC5.8□□□□□ -1.48
Msx2Q03358 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Msx2Q03358 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Msx2Q03358 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
Msx2Q03358 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Msx2Q03358 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Msx2Q03358 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Msx2Q03358 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.79□□□□□ -1.48
Msx2Q03358 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.79□□□□□ -1.48
Msx2Q03358 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.79□□□□□ -1.48
Msx2Q03358 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.79□□□□□ -1.48
Msx2Q03358 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.79□□□□□ -1.48
Msx2Q03358 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Msx2Q03358 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Msx2Q03358 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Msx2Q03358 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Msx2Q03358 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Msx2Q03358 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.79□□□□□ -1.48
Msx2Q03358 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Msx2Q03358 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Msx2Q03358 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Msx2Q03358 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC5.79□□□□□ -1.48
Msx2Q03358 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Msx2Q03358 Gm13482-201ENSMUST00000119842 254 ntBASIC5.79□□□□□ -1.48
Msx2Q03358 Gm12900-201ENSMUST00000120919 573 ntBASIC5.79□□□□□ -1.48
Msx2Q03358 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC5.79□□□□□ -1.48
Msx2Q03358 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.79□□□□□ -1.48
Msx2Q03358 Gm15696-201ENSMUST00000121730 445 ntBASIC5.79□□□□□ -1.48
Msx2Q03358 Gm12152-201ENSMUST00000122465 684 ntBASIC5.79□□□□□ -1.48
Msx2Q03358 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC5.79□□□□□ -1.48
Msx2Q03358 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Msx2Q03358 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms